Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation. - Wikidata - thesis-toulmin - TriplyDB

Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.

Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.

http://www.wikidata.org/entity/Q36494059

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The genome sequence of the model ascomycete fungus Podospora anserina Annotating genomes with massive-scale RNA sequencing GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release.Floral gene resources from basal angiosperms for comparative genomics research Characterization of 954 bovine full-CDS cDNA sequences.Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes The map-based sequence of the rice genome Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana.Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome.Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding Augmin plays a critical role in organizing the spindle and phragmoplast microtubule arrays in Arabidopsis.Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays.The mutation nrpb1-A325V in the largest subunit of RNA polymerase II suppresses compromised growth of Arabidopsis plants deficient in a function of the general transcription factor IIF.A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis)A Plasmodium falciparum FcB1-schizont-EST collection providing clues to schizont specific gene structure and polymorphism.A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.Characterization of full-length sequenced cDNA inserts (FLIcs) from Atlantic salmon (Salmo salar)Identification and analysis of in planta expressed genes of Magnaporthe oryzae.Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus)Comparative genomic analysis of 1047 completely sequenced cDNAs from an Arabidopsis-related model halophyte, Thellungiella halophila.Targeted SNP discovery in Atlantic salmon (Salmo salar) genes using a 3'UTR-primed SNP detection approach.Construction and characterization of a cDNA library from wheat infected with Fusarium graminearum Fg 2 ASEtrap: a biological method for speeding up the exploration of spliceomes.Web-based Arabidopsis functional and structural genomics resources.Identification of a DNA methylation-independent imprinting control region at the Arabidopsis MEDEA locus.The Schistosoma mansoni transcriptome: an update.Fuzzy logic in medicine and bioinformatics.Possible diversifying selection in the imprinted gene, MEDEA, in Arabidopsis Concerted assembly and cloning of multiple DNA segments using in vitro site-specific recombination: functional analysis of multi-segment expression clones.Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.Two closely related genes of Arabidopsis encode plastidial cytidinediphosphate diacylglycerol synthases essential for photoautotrophic growth.Two interacting proteins are necessary for the editing of the NdhD-1 site in Arabidopsis plastids.BTB and TAZ domain scaffold proteins perform a crucial function in Arabidopsis development.A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis.Extraplastidial cytidinediphosphate diacylglycerol synthase activity is required for vegetative development in Arabidopsis thaliana.Evolutionary expansion, gene structure, and expression of the rice wall-associated kinase gene family.A bifunctional locus (BIO3-BIO1) required for biotin biosynthesis in Arabidopsis.

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Whole genome sequence comparisons and "full-length" cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.

http://www.wikidata.org/entity/Q36494059

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2004 nî lūn-bûn

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2004年の論文

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Genome Research

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Whole genome sequence comparis ...... Arabidopsis genome annotation.

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Claude Scarpelli

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Gary Temple

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Jean-Marc Aury

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Manuella Menard

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Marcel Salanoubat

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Michel Caboche

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Vanina Castelli

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Vincent Schächter

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P2860

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

A large family of genes that share homology with CLAVATA3

Full-length messenger RNA sequences greatly improve genome annotation.

Empirical analysis of transcriptional activity in the Arabidopsis genome

Normalization and subtraction: two approaches to facilitate gene discovery

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

A computer program for aligning a cDNA sequence with a genomic DNA sequence

Alternative splicing of transcripts encoding Toll-like plant resistance proteins - what's the functional relevance to innate immunity?

Functional annotation of a full-length Arabidopsis cDNA collection.

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406-413

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10.1101/GR.1515604

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3

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14

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Jean Weissenbach

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Francis Quétier

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2004-03-01T00:00:00Z

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8681554

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14993207

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353228

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