Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships
about
POWRS: position-sensitive motif discoveryDistance and helical phase dependence of synergistic transcription activation in cis-regulatory moduleInferring transcription factor complexes from ChIP-seq data.Discovery of Novel Human Gene Regulatory Modules from Gene Co-expression and Promoter Motif Analysis.The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding.Discovery of stress responsive DNA regulatory motifs in Arabidopsis.Coordinated genome-wide modifications within proximal promoter cis-regulatory elements during vertebrate evolution.A Parzen window-based approach for the detection of locally enriched transcription factor binding sites.Nucleotide composition-linked divergence of vertebrate core promoter architecture.Incorporating motif analysis into gene co-expression networks reveals novel modular expression pattern and new signaling pathways.A set of structural features defines the cis-regulatory modules of antenna-expressed genes in Drosophila melanogaster.Enhancers regulate progression of development in mammalian cellsMost of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules.SP transcription factor paralogs and DNA-binding sites coevolve and adaptively converge in mammals and birds.Widespread evidence of cooperative DNA binding by transcription factors in Drosophila development.A high definition look at the NF-Y regulome reveals genome-wide associations with selected transcription factors.Decoding a signature-based model of transcription cofactor recruitment dictated by cardinal cis-regulatory elements in proximal promoter regions.
P2860
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P2860
Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
@pt
bilimsel makale
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scientific article published on 29 May 2009
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Measuring spatial preferences ...... ional motif-pair relationships
@en
Measuring spatial preferences ...... onal motif-pair relationships.
@nl
type
label
Measuring spatial preferences ...... ional motif-pair relationships
@en
Measuring spatial preferences ...... onal motif-pair relationships.
@nl
prefLabel
Measuring spatial preferences ...... ional motif-pair relationships
@en
Measuring spatial preferences ...... onal motif-pair relationships.
@nl
P2860
P356
P1476
Measuring spatial preferences ...... ional motif-pair relationships
@en
P2093
Gregory A Wray
Ken Daigoro Yokoyama
P2860
P356
10.1093/NAR/GKP423
P407
P50
P577
2009-05-29T00:00:00Z