about
Codon size reduction as the origin of the triplet genetic code.Recode-2: new design, new search tools, and many more genesTranscriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expressionRibosome profiling: a Hi-Def monitor for protein synthesis at the genome-wide scaleRibosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious useThe 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolutionIdentification of evolutionarily conserved non-AUG-initiated N-terminal extensions in human coding sequencesProgrammed ribosomal frameshifting in decoding the SARS-CoV genomeDarned in 2013: inclusion of model organisms and linking with WikipediaTranslation of 5' leaders is pervasive in genes resistant to eIF2 repressionComputational approach for calculating the probability of eukaryotic translation initiation from ribo-seq data that takes into account leaky scanning.Diverse bacterial genomes encode an operon of two genes, one of which is an unusual class-I release factor that potentially recognizes atypical mRNA signals other than normal stop codonsOrnithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAsAnalysis of tetra- and hepta-nucleotides motifs promoting -1 ribosomal frameshifting in Escherichia coli.Recoding: translational bifurcations in gene expression.Evidence of efficient stop codon readthrough in four mammalian genesObservation of dually decoded regions of the human genome using ribosome profiling dataNovel Ciliate Genetic Code Variants Including the Reassignment of All Three Stop Codons to Sense Codons in Condylostoma magnum.Insights into the mechanisms of eukaryotic translation gained with ribosome profilingOverriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression.A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment.Productive mRNA stem loop-mediated transcriptional slippage: Crucial features in common with intrinsic terminators.Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutesP-site tRNA is a crucial initiator of ribosomal frameshifting.Recoding in bacteriophages and bacterial IS elements.GeneTack database: genes with frameshifts in prokaryotic genomes and eukaryotic mRNA sequencesSystematic analysis of the PTEN 5' leader identifies a major AUU initiated proteoform.Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli.Position-dependent termination and widespread obligatory frameshifting in Euplotes translation.GWIPS-viz: development of a ribo-seq genome browser.Identification of A-to-I RNA editing: dotting the i's in the human transcriptome.Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.Low energy costs of F1Fo ATP synthase reversal in colon carcinoma cells deficient in mitochondrial complex IV.Comparative survey of the relative impact of mRNA features on local ribosome profiling read density.Programmed ribosomal frameshifting in the expression of the regulator of intestinal stem cell proliferation, adenomatous polyposis coli (APC).A new technique for the characterization of long-range tertiary contacts in large RNA molecules: insertion of a photolabel at a selected position in 16S rRNA within the Escherichia coli ribosome.The Database of Ribosomal Cross links (DRC).The Database of Ribosomal Cross-links: an updateRECODE 2003.GWIPS-viz as a tool for exploring ribosome profiling evidence supporting the synthesis of alternative proteoforms.
P50
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P50
description
hulumtues
@sq
onderzoeker
@nl
researcher
@en
հետազոտող
@hy
name
Pavel Baranov
@en
Pavel V Baranov
@ast
Pavel V Baranov
@es
Pavel V Baranov
@nl
Pavel V Baranov
@sl
Pawel Wiktorowitsch Baranow
@de
Павел Викторович Баранов
@ru
type
label
Pavel Baranov
@en
Pavel V Baranov
@ast
Pavel V Baranov
@es
Pavel V Baranov
@nl
Pavel V Baranov
@sl
Pawel Wiktorowitsch Baranow
@de
Павел Викторович Баранов
@ru
altLabel
Pavel V Baranov
@en
Pavel Viktorovich Baranov
@en
Pawel Baranow
@de
prefLabel
Pavel Baranov
@en
Pavel V Baranov
@ast
Pavel V Baranov
@es
Pavel V Baranov
@nl
Pavel V Baranov
@sl
Pawel Wiktorowitsch Baranow
@de
Павел Викторович Баранов
@ru
P1053
A-2782-2011
P106
P21
P2456
P31
P3829
P4012
P496
0000-0001-9017-0270