Minimization and optimization of designed beta-hairpin folds - Wikidata - thesis-toulmin - TriplyDB

Minimization and optimization of designed beta-hairpin folds

Minimization and optimization of designed beta-hairpin folds

http://www.wikidata.org/entity/Q38280257

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The Trp-cage: optimizing the stability of a globular miniprotein Circular Permutation of a WW Domain: Folding Still Occurs after Excising the Turn of the Folding-Nucleating Hairpin Implications of aromatic-aromatic interactions: From protein structures to peptide models An improved capping unit for stabilizing the ends of associated β-strands.Multiobjective evolutionary algorithm with many tables for purely ab initio protein structure prediction.Probing the lower size limit for protein-like fold stability: ten-residue microproteins with specific, rigid structures in water Cyclic modular beta-sheets Solution state structures of human pancreatic amylin and pramlintide.Stabilizing capping motif for beta-hairpins and sheets.Captides: rigid junctions between beta sheets and small molecules.β-Sheet 13C structuring shifts appear only at the H-bonded sites of hairpins.Design of a zinc-finger hydrolase with a synthetic αββ protein.Cross-strand histidine-aromatic interactions enhance acyl-transfer rates in beta-hairpin peptide catalysts.Protein folding as a complex reaction: a two-component potential for the driving force of folding and its variation with folding scenario.X-ray Crystallographic Structure of Oligomers Formed by a Toxic β-Hairpin Derived from α-Synuclein: Trimers and Higher-Order Oligomers.Mutational effects on the folding dynamics of a minimized hairpin.Very short peptides with stable folds: building on the interrelationship of Trp/Trp, Trp/cation, and Trp/backbone-amide interaction geometries.Conformationally constrained peptides from CD2 to modulate protein-protein interactions between CD2 and CD58.Designed hairpin peptides interfere with amyloidogenesis pathways: fibril formation and cytotoxicity inhibition, interception of the preamyloid state The sensitivity of folding free energy landscapes of trpzips to mutations in the hydrophobic core.Optimization of a β-sheet-cap for long loop closure.Molecular dynamics analysis of the conformations of a beta-hairpin miniprotein.Aryl-Aryl interactions in designed peptide folds: Spectroscopic characteristics and placement issues for optimal structure stabilization.A Structuring Repeat for Peptide Design: Long Beta Ribbons.VCD spectroscopic properties of the beta-hairpin forming miniprotein CLN025 in various solvents.Optimizing the fold stability of miniprotein sequences.The CLN025 decapeptide retains a β-hairpin conformation in urea and guanidinium chloride.Determinants of fold stabilizing aromatic-aromatic interactions in short peptides Terminal sidechain packing of a designed beta-hairpin influences conformation and stability.Binding Interactions of Agents That Alter α-Synuclein Aggregation.Formation of a pseudo-β-hairpin motif utilizing the Ant-Pro reverse turn: consequences of stereochemical reordering.Protein folding: complex potential for the driving force in a two-dimensional space of collective variables.Hairpin structure stability plays a role in the activity of two antimicrobial peptides.Peptide ligands for targeting the extracellular domain of EGFR: Comparison between linear and cyclic peptides.Evaluating the peptide structure prediction capabilities of a purely ab-initio method.13C structuring shifts for the analysis of model β-hairpins and β-sheets in proteins: diagnostic shifts appear only at the cross-strand H-bonded residues.Stereopositional Outcome in the Packing of Dissimilar Aromatics in Designed β-Hairpins.Enhancement of sortase A-mediated protein ligation by inducing a β-hairpin structure around the ligation site Trp-Trp pairs as β-hairpin stabilisers: Hydrogen-bonded versus non-hydrogen-bonded sites

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P2860

Minimization and optimization of designed beta-hairpin folds

http://www.wikidata.org/entity/Q38280257

description

2006 nî lūn-bûn

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年論文

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2006年论文

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2006年论文

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2006年论文

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name

Minimization and optimization of designed beta-hairpin folds

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Minimization and optimization of designed beta-hairpin folds

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Minimization and optimization of designed beta-hairpin folds

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Journal of the American Chemical Society

P1476

Minimization and optimization of designed beta-hairpin folds

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F Michael Hudson

http://www.w3.org/2001/XMLSchema#string

Katherine A Olsen

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Lisa A Eidenschink

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Niels H Andersen

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R Matthew Fesinmeyer

http://www.w3.org/2001/XMLSchema#string

Shabnam R Farazi

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Xu Tan

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P2860

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Tryptophan zippers: Stable, monomeric -hairpins

Exendin-4 and glucagon-like-peptide-1: NMR structural comparisons in the solution and micelle-associated states

BetaCore, a designed water soluble four-stranded antiparallel β-sheet protein

Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair

Turn stability in β-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

MOLMOL: a program for display and analysis of macromolecular structures

A short linear peptide that folds into a native stable beta-hairpin in aqueous solution

Elongation of the BH8 beta-hairpin peptide: Electrostatic interactions in beta-hairpin formation and stability

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10.1021/JA054971W

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18

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16669679

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3164952

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