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A new class of highly efficient exact stochastic simulation algorithms for chemical reaction networksA partial-propensity variant of the composition-rejection stochastic simulation algorithm for chemical reaction networksA partial-propensity formulation of the stochastic simulation algorithm for chemical reaction networks with delaysMosaicIA: an ImageJ/Fiji plugin for spatial pattern and interaction analysisA method for modeling growth of organs and transplants based on the general growth law: application to the liver in dogs and humansA Parallel Distributed-Memory Particle Method Enables Acquisition-Rate Segmentation of Large Fluorescence Microscopy ImagesClearVolume: open-source live 3D visualization for light-sheet microscopySingle-particle tracking of murine polyoma virus-like particles on live cells and artificial membranes.Effects of organelle shape on fluorescence recovery after photobleaching.Beyond co-localization: inferring spatial interactions between sub-cellular structures from microscopy imagesModeling and simulation of biological systems from image data.Shape reconstruction of subcellular structures from live cell fluorescence microscopy images.Intrinsically disordered regions may lower the hydration free energy in proteins: a case study of nudix hydrolase in the bacterium Deinococcus radiodurans.Proteome sequence features carry signatures of the environmental niche of prokaryotes.Dynamic measurement of the height and volume of migrating cells by a novel fluorescence microscopy technique.Objective comparison of particle tracking methods.Discrete region competition for unknown numbers of connected regions.Segmentation and quantification of subcellular structures in fluorescence microscopy images using Squassh.Intrinsic noise alters the frequency spectrum of mesoscopic oscillatory chemical reaction systems.Septin-dependent compartmentalization of the endoplasmic reticulum during yeast polarized growthSeeing Is Believing: Quantifying Is Convincing: Computational Image Analysis in Biology.Curvature Filters Efficiently Reduce Certain Variational Energies.Feature point tracking and trajectory analysis for video imaging in cell biology.L p -Adaptation: Simultaneous Design Centering and Robustness Estimation of Electronic and Biological Systems.Simulations of (an)isotropic diffusion on curved biological surfaces.Automatic optimal filament segmentation with sub-pixel accuracy using generalized linear models and B-spline level-sets.Receptor concentration and diffusivity control multivalent binding of Sv40 to membrane bilayers.pSSAlib: The partial-propensity stochastic chemical network simulator.A Lagrangian particle method for reaction-diffusion systems on deforming surfaces.High-resolution cell outline segmentation and tracking from phase-contrast microscopy images.Energy landscapes of atomic clusters as black box optimization benchmarks.Discreteness-induced concentration inversion in mesoscopic chemical systems.Exact on-lattice stochastic reaction-diffusion simulations using partial-propensity methods.Global parameter identification of stochastic reaction networks from single trajectories.In the eye of the beholder: Inhomogeneous distribution of high-resolution shapes within the random-walk ensemble.A novel supervised trajectory segmentation algorithm identifies distinct types of human adenovirus motion in host cells.A Predictive 3D Multi-Scale Model of Biliary Fluid Dynamics in the Liver Lobule.Adaptive particle representation of fluorescence microscopy imagesThermophoretic motion of water nanodroplets confined inside carbon nanotubesActive flows cluster cell surface proteins
P50
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P50
description
hulumtues
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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Ivo F Sbalzarini
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P106
P21
P2456
P31
P496
0000-0003-4414-4340