about
UKPMC: a full text article resource for the life sciencesMedEvi: retrieving textual evidence of relations between biomedical concepts from MedlineEBIMed--text crunching to gather facts for proteins from MedlineFacts from text--is text mining ready to deliver?Pathway enrichment based on text mining and its validation on carotenoid and vitamin A metabolismPaperMaker: validation of biomedical scientific publicationsText-mining solutions for biomedical research: enabling integrative biologyEvaluation and cross-comparison of lexical entities of biological interest (LexEBI)The functional therapeutic chemical classification systemLearning to recognize phenotype candidates in the auto-immune literature using SVM re-rankingReuse of terminological resources for efficient ontological engineering in Life SciencesText mining for biology - the way forward: opinions from leading scientistsPhenoMiner: from text to a database of phenotypes associated with OMIM diseases.SAFE: SPARQL Federation over RDF Data Cubes with Access ControlBioFed: federated query processing over life sciences linked open dataImproving data workflow systems with cloud services and use of open data for bioinformatics research.Towards virtual knowledge broker services for semantic integration of life science literature and data sources.A case study: semantic integration of gene-disease associations for type 2 diabetes mellitus from literature and biomedical data resources.Enriching a biomedical event corpus with meta-knowledge annotation.Improving disease gene prioritization by comparing the semantic similarity of phenotypes in mice with those of human diseases.Using argumentation to extract key sentences from biomedical abstracts.Assessment of disease named entity recognition on a corpus of annotated sentences.Facilitating the development of controlled vocabularies for metabolomics technologies with text mining.Gene Regulation Ontology (GRO): design principles and use cases.Integrating protein-protein interactions and text mining for protein function prediction.Between proteins and phenotypes: annotation and interpretation of mutations.Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.Thematic series on biomedical ontologies in JBMS: challenges and new directions.Evaluating gold standard corpora against gene/protein tagging solutions and lexical resourcesRelations as patterns: bridging the gap between OBO and OWLBiomedical semantics: the hub for biomedical research 2.0.Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoningHarmonization of gene/protein annotations: towards a gold standard MEDLINE.Interoperability between phenotype and anatomy ontologies.Brain: biomedical knowledge manipulation.A common layer of interoperability for biomedical ontologies based on OWL EL.Towards mature use of semantic resources for biomedical analyses.Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology taskPCorral--interactive mining of protein interactions from MEDLINEA multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC.
P50
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P50
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