Asap: a framework for over-representation statistics for transcription factor binding sites
about
Isoform diversity and regulation in peripheral and central neurons revealed through RNA-SeqMicroRNA-145 targets YES and STAT1 in colon cancer cellsScerTF: a comprehensive database of benchmarked position weight matrices for Saccharomyces speciesAnalysis of Genomic Sequence Motifs for Deciphering Transcription Factor Binding and Transcriptional Regulation in Eukaryotic CellsGenome-wide location analysis reveals distinct transcriptional circuitry by paralogous regulators Foxa1 and Foxa2Condition-specific target prediction from motifs and expression.Improving analysis of transcription factor binding sites within ChIP-Seq data based on topological motif enrichmentDiscovery of regulatory elements is improved by a discriminatory approach.Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data.Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes.A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes.Transcriptional regulation of gene expression clusters in motor neurons following spinal cord injuryGene duplications in prokaryotes can be associated with environmental adaptation.Large-scale investigation of human TF-miRNA relations based on coexpression profiles.Cross species comparison of C/EBPα and PPARγ profiles in mouse and human adipocytes reveals interdependent retention of binding sites.Dioxin increases the interaction between aryl hydrocarbon receptor and estrogen receptor alpha at human promoters.Foxa2-dependent hepatic gene regulatory networks depend on physiological stateGenome-wide detection and analysis of hippocampus core promoters using DeepCAGE.Global identification of SMAD2 target genes reveals a role for multiple co-regulatory factors in zebrafish early gastrulas.Isoform diversity and its importance for axon regeneration.The genome landscape of ERalpha- and ERbeta-binding DNA regions.Temporal mapping of CEBPA and CEBPB binding during liver regeneration reveals dynamic occupancy and specific regulatory codes for homeostatic and cell cycle gene batteriesPrinciples for RNA metabolism and alternative transcription initiation within closely spaced promoters.Inhibition of miR-9 de-represses HuR and DICER1 and impairs Hodgkin lymphoma tumour outgrowth in vivo.Propagation of adipogenic signals through an epigenomic transition state.Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes.Nuclear stability and transcriptional directionality separate functionally distinct RNA species.Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality.A conceptual framework for the identification of candidate drugs and drug targets in acute promyelocytic leukemia3-methylcholanthrene induces differential recruitment of aryl hydrocarbon receptor to human promoters
P2860
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P2860
Asap: a framework for over-representation statistics for transcription factor binding sites
description
2008 nî lūn-bûn
@nan
2008 թուականին հրատարակուած գիտական յօդուած
@hyw
2008 թվականին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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Asap: A Framework for Over-Rep ...... scription Factor Binding Sites
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prefLabel
Asap: a framework for over-rep ...... scription factor binding sites
@ast
Asap: a framework for over-rep ...... scription factor binding sites
@en
Asap: a framework for over-rep ...... scription factor binding sites
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Asap: a framework for over-rep ...... scription factor binding sites
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P2860
P50
P3181
P1433
P1476
Asap: a framework for over-rep ...... scription factor binding sites
@en
P2093
Dorota Retelska
Martin Thiim
P2860
P3181
P356
10.1371/JOURNAL.PONE.0001623
P407
P577
2008-01-01T00:00:00Z