Transcript length bias in RNA-seq data confounds systems biology
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From RNA-seq reads to differential expression resultsA scaling normalization method for differential expression analysis of RNA-seq dataJellyfish Bioactive Compounds: Methods for Wet-Lab WorkPractical aspects of NGS-based pathways analysis for personalized cancer science and medicineAnalysis of Whole Transcriptome Sequencing Data: Workflow and SoftwarePathway Analysis: State of the ArtAdvanced Applications of RNA Sequencing and ChallengesDifferential gene expression in the siphonophore Nanomia bijuga (Cnidaria) assessed with multiple next-generation sequencing workflowsA survey of best practices for RNA-seq data analysisIdentification of co-expression gene networks, regulatory genes and pathways for obesity based on adipose tissue RNA Sequencing in a porcine modelGene-set analysis is severely biased when applied to genome-wide methylation dataGeneral lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seqPhysioSpace: relating gene expression experiments from heterogeneous sources using shared physiological processesIdentification and characterization of microRNAs expressed in the African malaria vector Anopheles funestus life stages using high throughput sequencingRNA Sequencing and AnalysisGrouped False-Discovery Rate for Removing the Gene-Set-Level Bias of RNA-seqProbabilistic error correction for RNA sequencingProtocol dependence of sequencing-based gene expression measurementsTranscriptome genetics using second generation sequencing in a Caucasian populationEvaluation of statistical methods for normalization and differential expression in mRNA-Seq experimentsRNA sequencing: advances, challenges and opportunitiesGene expression analysis of rocket salad under pre-harvest and postharvest stresses: A transcriptomic resource for Diplotaxis tenuifolia.Toward reliable biomarker signatures in the age of liquid biopsies - how to standardize the small RNA-Seq workflowEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics.LOESS correction for length variation in gene set-based genomic sequence analysis.Estimation of data-specific constitutive exons with RNA-Seq data.Differential expression analysis for paired RNA-Seq dataDifferential gene expression analysis using coexpression and RNA-Seq data.Data-based filtering for replicated high-throughput transcriptome sequencing experiments.Calculating sample size estimates for RNA sequencing data.NPEBseq: nonparametric empirical bayesian-based procedure for differential expression analysis of RNA-seq dataStatistical and Computational Methods for High-Throughput Sequencing Data Analysis of Alternative Splicing.Comparative studies of differential gene calling using RNA-Seq data.Transforming RNA-Seq data to improve the performance of prognostic gene signatures.Statistical Issues in the Analysis of ChIP-Seq and RNA-Seq Data.Integrative RNA-seq and microarray data analysis reveals GC content and gene length biases in the psoriasis transcriptomeMeasuring differential gene expression with RNA-seq: challenges and strategies for data analysis.Comparative evaluation of gene set analysis approaches for RNA-Seq data.Co-expression analysis of high-throughput transcriptome sequencing data with Poisson mixture models.Analysis of genome-wide RNA-sequencing data suggests age of the CEPH/Utah (CEU) lymphoblastoid cell lines systematically biases gene expression profiles.
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P2860
Transcript length bias in RNA-seq data confounds systems biology
description
2009 nî lūn-bûn
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2009 թուականին հրատարակուած գիտական յօդուած
@hyw
2009 թվականին հրատարակված գիտական հոդված
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2009年の論文
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2009年論文
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2009年論文
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2009年論文
@zh-hk
2009年論文
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2009年論文
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2009年论文
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name
Transcript length bias in RNA-seq data confounds systems biology
@ast
Transcript length bias in RNA-seq data confounds systems biology
@en
Transcript length bias in RNA-seq data confounds systems biology
@en-gb
Transcript length bias in RNA-seq data confounds systems biology
@nl
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Transcript length bias in RNA-seq data confounds systems biology
@ast
Transcript length bias in RNA-seq data confounds systems biology
@en
Transcript length bias in RNA-seq data confounds systems biology
@en-gb
Transcript length bias in RNA-seq data confounds systems biology
@nl
prefLabel
Transcript length bias in RNA-seq data confounds systems biology
@ast
Transcript length bias in RNA-seq data confounds systems biology
@en
Transcript length bias in RNA-seq data confounds systems biology
@en-gb
Transcript length bias in RNA-seq data confounds systems biology
@nl
P2860
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Transcript length bias in RNA-seq data confounds systems biology
@en
P2860
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P356
10.1186/1745-6150-4-14
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2009-01-01T00:00:00Z
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1045373440