Corpus annotation for mining biomedical events from literature - Wikidata - wikimedia - TriplyDB

Corpus annotation for mining biomedical events from literature

Corpus annotation for mining biomedical events from literature

http://www.wikidata.org/entity/Q21284210

about

Open Biomedical Ontology-based Medline exploration Text Mining the History of Medicine Using natural language processing techniques to inform research on nanotechnology Event-based text mining for biology and functional genomics Biomedical relation extraction: from binary to complex Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011 A single kernel-based approach to extract drug-drug interactions from biomedical literature Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2 KnowLife: a versatile approach for constructing a large knowledge graph for biomedical sciences A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text Mining the pharmacogenomics literature--a survey of the state of the art U-Compare bio-event meta-service: compatible BioNLP event extraction services Linguistic scope-based and biological event-based speculation and negation annotations in the BioScope and Genia Event corpora Automatic extraction of angiogenesis bioprocess from text Large-scale directional relationship extraction and resolution Construction of an annotated corpus to support biomedical information extraction BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events.Concept annotation in the CRAFT corpus.BioCause: Annotating and analysing causality in the biomedical domain Negated bio-events: analysis and identification Augmenting microarray data with literature-based knowledge to enhance gene regulatory network inference.BioDEAL: community generation of biological annotations.Self-training in significance space of support vectors for imbalanced biomedical event data Enriching a biomedical event corpus with meta-knowledge annotation.New challenges for text mining: mapping between text and manually curated pathways.BibGlimpse: the case for a light-weight reprint manager in distributed literature research All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning The BioScope corpus: biomedical texts annotated for uncertainty, negation and their scopes A realistic assessment of methods for extracting gene/protein interactions from free text.Getting started in text mining: part two.From SNPs to pathways: integration of functional effect of sequence variations on models of cell signalling pathways The first step in the development of Text Mining technology for Cancer Risk Assessment: identifying and organizing scientific evidence in risk assessment literature Challenges for automatically extracting molecular interactions from full-text articles.ISDB: Interaction Sentence Database.An interactive and user-centered computer system to predict physician's disease judgments in discharge summaries Word sense disambiguation for event trigger word detection in biomedicine.Assigning factuality values to semantic relations extracted from biomedical research literature.Complex event extraction at PubMed scale PathText: a text mining integrator for biological pathway visualizations.Semantic annotation of biological concepts interplaying microbial cellular responses.

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Corpus annotation for mining biomedical events from literature

http://www.wikidata.org/entity/Q21284210

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2008 nî lūn-bûn

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Corpus annotation for mining biomedical events from literature

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Corpus annotation for mining biomedical events from literature

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Corpus annotation for mining biomedical events from literature

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Corpus annotation for mining biomedical events from literature

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BMC Bioinformatics

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Corpus annotation for mining biomedical events from literature

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Jin-Dong Kim

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Relations in biomedical ontologies

Gene ontology: tool for the unification of biology

Content-rich biological network constructed by mining PubMed abstracts

PASBio: predicate-argument structures for event extraction in molecular biology

Which gene did you mean?

Pathguide: a pathway resource list

Building an abbreviation dictionary using a term recognition approach

Evolving a lingua franca and associated software infrastructure for computational systems biology: the Systems Biology Markup Language (SBML) project

Implementing the iHOP concept for navigation of biomedical literature

The Unified Medical Language System (UMLS): integrating biomedical terminology.

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scholarly article

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10.1186/1471-2105-9-10

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1

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Jun'ichi Tsujii

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medical literature

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