Phylogenomic inference of protein molecular function: advances and challenges
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Functional classification using phylogenomic inferenceProceedings of the First International Conference on Phylogenomics. March 15-19, 2006. Quebec, CanadaGene function classification using Bayesian models with hierarchy-based priorsB2G-FAR, a species-centered GO annotation repositoryEvolutionary and functional relationships within the DJ1 superfamilyFIGENIX: intelligent automation of genomic annotation: expertise integration in a new software platformProtein molecular function prediction by Bayesian phylogenomics.Kalign--an accurate and fast multiple sequence alignment algorithmInsect phylogenomicsMolecular evolution of the polyamine oxidase gene family in MetazoaUsing phylogenomic patterns and gene ontology to identify proteins of importance in plant evolutionGetting started in structural phylogenomicsIntegrating protein structures and precomputed genealogies in the Magnum database: examples with cellular retinoid binding proteins.Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study analyzing the neurotransmitter/Na+ symporter family.Global alignment of protein-protein interaction networks by graph matching methods.Protein interactions and ligand binding: from protein subfamilies to functional specificity.Phylogeny of Na+/Ca2+ exchanger (NCX) genes from genomic data identifies new gene duplications and a new family member in fish species.Benchmarking ortholog identification methods using functional genomics data.The FGGY carbohydrate kinase family: insights into the evolution of functional specificitiesA large-scale collection of phenotypic data describing an insertional mutant population to facilitate functional analysis of rice genes.Using phylogeny to improve genome-wide distant homology recognition.FlowerPower: clustering proteins into domain architecture classes for phylogenomic inference of protein function.Automatic extraction of reliable regions from multiple sequence alignments.CLUSS: clustering of protein sequences based on a new similarity measure.Automated protein subfamily identification and classification.The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotationUsing ESTs for phylogenomics: can one accurately infer a phylogenetic tree from a gappy alignment?De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural featuresAssessing the evolution of gene expression using microarray dataChanging from computing grid to knowledge grid in life-science grid.Arabidopsis thaliana PGR7 encodes a conserved chloroplast protein that is necessary for efficient photosynthetic electron transport.Comparative phylogenomics of the CBL-CIPK calcium-decoding network in the moss Physcomitrella, Arabidopsis, and other green lineages.Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes.Computational methods for Gene Orthology inferenceSATCHMO-JS: a webserver for simultaneous protein multiple sequence alignment and phylogenetic tree construction.Computational biophysical, biochemical, and evolutionary signature of human R-spondin family proteins, the member of canonical Wnt/β-catenin signaling pathwayRefining discordant gene treesThree-level prediction of protein function by combining profile-sequence search, profile-profile search, and domain co-occurrence networks.Cross-Genome Comparisons of Newly Identified Domains in Mycoplasma gallisepticum and Domain Architectures with Other Mycoplasma species.
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P2860
Phylogenomic inference of protein molecular function: advances and challenges
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2004 nî lūn-bûn
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2004 թուականի Յունուարին հրատարակուած գիտական յօդուած
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2004 թվականի հունվարին հրատարակված գիտական հոդված
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2004年の論文
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2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
Phylogenomic inference of protein molecular function: advances and challenges
@ast
Phylogenomic inference of protein molecular function: advances and challenges
@en
Phylogenomic inference of protein molecular function: advances and challenges
@en-gb
Phylogenomic inference of protein molecular function: advances and challenges
@nl
type
label
Phylogenomic inference of protein molecular function: advances and challenges
@ast
Phylogenomic inference of protein molecular function: advances and challenges
@en
Phylogenomic inference of protein molecular function: advances and challenges
@en-gb
Phylogenomic inference of protein molecular function: advances and challenges
@nl
prefLabel
Phylogenomic inference of protein molecular function: advances and challenges
@ast
Phylogenomic inference of protein molecular function: advances and challenges
@en
Phylogenomic inference of protein molecular function: advances and challenges
@en-gb
Phylogenomic inference of protein molecular function: advances and challenges
@nl
P356
P1433
P1476
Phylogenomic inference of protein molecular function: advances and challenges
@en
P356
10.1093/BIOINFORMATICS/BTH021
P407
P577
2004-01-20T00:00:00Z
2004-01-22T00:00:00Z