Detecting autozygosity through runs of homozygosity: a comparison of three autozygosity detection algorithms - Wikidata - wikimedia - TriplyDB

Detecting autozygosity through runs of homozygosity: a comparison of three autozygosity detection algorithms

Detecting autozygosity through runs of homozygosity: a comparison of three autozygosity detection algorithms

http://www.wikidata.org/entity/Q24288970

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A genome-wide analysis of populations from European Russia reveals a new pole of genetic diversity in northern Europe A high-coverage genome sequence from an archaic Denisovan individual Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape Genomic data as the "hitchhiker's guide" to cattle adaptation: tracking the milestones of past selection in the bovine genome Genomic and archaeological evidence suggest a dual origin of domestic dogs Runs of Homozygosity: Association with Coronary Artery Disease and Gene Expression in Monocytes and Macrophages Inferring population size changes with sequence and SNP data: lessons from human bottlenecks.Evidence of recessive Alzheimer disease loci in a Caribbean Hispanic data set: genome-wide survey of runs of homozygosity.H3M2: detection of runs of homozygosity from whole-exome sequencing data.BCFtools/RoH: a hidden Markov model approach for detecting autozygosity from next-generation sequencing data.The association of genotype-based inbreeding coefficient with a range of physical and psychological human traits.Runs of homozygosity implicate autozygosity as a schizophrenia risk factor.Estimating autozygosity from high-throughput information: effects of SNP density and genotyping errors A recessive genetic model and runs of homozygosity in major depressive disorder.Assessment of autozygosity in Nellore cows (Bos indicus) through high-density SNP genotypes.Educational attainment influences levels of homozygosity through migration and assortative mating.Quantifying realized inbreeding in wild and captive animal populations.Exome sequencing of case-unaffected-parents trios reveals recessive and de novo genetic variants in sporadic ALS.Effective population size, extended linkage disequilibrium and signatures of selection in the rare dog breed lundehund Genomic analysis for managing small and endangered populations: a case study in Tyrol Grey cattle Runs of homozygosity and inbreeding in thyroid cancer.Evidence of Inbreeding in Hodgkin Lymphoma.Small Traditional Human Communities Sustain Genomic Diversity over Microgeographic Scales despite Linguistic Isolation.Extensive genome-wide autozygosity in the population isolates of Daghestan.No Reliable Association between Runs of Homozygosity and Schizophrenia in a Well-Powered Replication Study.Inbreeding and homozygosity in breast cancer survival.No evidence for rare recessive and compound heterozygous disruptive variants in schizophrenia.Genomics of a revived breed: Case study of the Belgian campine cattle.Maintenance of genetic variation in human personality: testing evolutionary models by estimating heritability due to common causal variants and investigating the effect of distant inbreeding.Genome-wide autozygosity is associated with lower general cognitive ability A homozygous mucosa-associated lymphoid tissue 1 (MALT1) mutation in a family with combined immunodeficiency.Genomic analysis reveals depression due to both individual and maternal inbreeding in a free-living mammal population.A genome-wide perspective about the diversity and demographic history of seven Spanish goat breeds.Association between autozygosity and major depression: stratification due to religious assortment Deficiency of base excision repair enzyme NEIL3 drives increased predisposition to autoimmunity.Novel Graphical Analyses of Runs of Homozygosity among Species and Livestock Breeds.The locust genome provides insight into swarm formation and long-distance flight Genome-wide estimates of inbreeding in unrelated individuals and their association with cognitive ability.Discovery of rare homozygous mutations from studies of consanguineous pedigrees.Estimation of inbreeding depression on female fertility in the Finnish Ayrshire population.

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Detecting autozygosity through runs of homozygosity: a comparison of three autozygosity detection algorithms

http://www.wikidata.org/entity/Q24288970

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Daniel P Howrigan

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Matthew A Simonson

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Matthew C Keller

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Why most published research findings are false

A map of recent positive selection in the human genome

Genetic traces of ancient demography

Genome-wide detection and characterization of positive selection in human populations

CEP152 is a genome maintenance protein disrupted in Seckel syndrome

Risk of breast and prostate cancer is not associated with increased homozygosity in outbred populations

A map of human genome variation from population-scale sequencing

A missense mutation in DHDDS, encoding dehydrodolichyl diphosphate synthase, is associated with autosomal-recessive retinitis pigmentosa in Ashkenazi Jews

Common variants on chromosome 6p22.1 are associated with schizophrenia

Runs of homozygosity in European populations

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1026388981

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21943305

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3188534

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