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Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding

Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding

http://www.wikidata.org/entity/Q24540300

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Functional taxonomy of bacterial hyperstructures Replisome Assembly at Bacterial Chromosomes and Iteron Plasmids Structural similarity between the DnaA-binding proteins HobA (HP1230) from Helicobacter pylori and DiaA from Escherichia coli Structural Synergy and Molecular Crosstalk between Bacterial Helicase Loaders and Replication Initiators Structural insights into the cooperative binding of SeqA to a tandem GATC repeat The intrinsic ATPase activity of Mycobacterium tuberculosis DnaA promotes rapid oligomerization of DnaA on oriC Escherichia coli DnaA forms helical structures along the longitudinal cell axis distinct from MreB filaments.Metagenomic DNA fragments that affect Escherichia coli mutational pathways.The ancestral role of ATP hydrolysis in type II topoisomerases: prevention of DNA double-strand breaks.DnaAcos hyperinitiates by circumventing regulatory pathways that control the frequency of initiation in Escherichia coli.Mycobacterium tuberculosis origin of replication and the promoter for immunodominant secreted antigen 85B are the targets of MtrA, the essential response regulator DNA linking number change induced by sequence-specific DNA-binding proteins Ribonucleotide reductase and the regulation of DNA replication: an old story and an ancient heritage.AT-rich region and repeated sequences - the essential elements of replication origins of bacterial replicons.Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex.The Fis protein has a stimulating role in initiation of replication in Escherichia coli in vivo.Two oppositely oriented arrays of low-affinity recognition sites in oriC guide progressive binding of DnaA during Escherichia coli pre-RC assembly.Architecture and conservation of the bacterial DNA replication machinery, an underexploited drug target.Mechanism for the TtDnaA-Tt-oriC cooperative interaction at high temperature and duplex opening at an unusual AT-rich region in Thermoanaerobacter tengcongensis.Multiple origins of replication contribute to a discontinuous pattern of DNA synthesis across the T4 genome during infection.Mutational analysis reveals Escherichia coli oriC interacts with both DnaA-ATP and DnaA-ADP during pre-RC assembly Replication initiator DnaA of Escherichia coli changes its assembly form on the replication origin during the cell cycle.A role for nonessential domain II of initiator protein, DnaA, in replication control.Bacterial origin recognition complexes direct assembly of higher-order DnaA oligomeric structures DnaA, ORC, and Cdc6: similarity beyond the domains of life and diversity.Helicobacter pylori chromosomal DNA replication: current status and future perspectives.Regulation of DnaA assembly and activity: taking directions from the genome.Regulating DNA replication in bacteria.Replacement of Mycobacterium smegmatis dnaA gene by Mycobacterium tuberculosis homolog results in temperature sensitivity.Localization of acidic phospholipid cardiolipin and DnaA in mycobacteria.Untwisting of the DNA helix stimulates the endonuclease activity of Bacillus subtilis Nth at AP sites Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling.SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC.Initiating chromosome replication in E. coli: it makes sense to recycle Soj/ParA stalls DNA replication by inhibiting helix formation of the initiator protein DnaA.Single-molecule atomic force spectroscopy reveals that DnaD forms scaffolds and enhances duplex melting.Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method.The Bacillus subtilis primosomal protein DnaD untwists supercoiled DNA.The DnaA homolog of the hyperthermophilic eubacterium Thermotoga maritima forms an open complex with a minimal 149-bp origin region in an ATP-dependent manner.Initiation of DNA Replication.

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Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding

http://www.wikidata.org/entity/Q24540300

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2005 nî lūn-bûn

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2005 թուականի Փետրուարին հրատարակուած գիտական յօդուած

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2005年の論文

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Molecular Microbiology

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Julia E Grimwade

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The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation

Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA

The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli.

In vivo studies of DnaA binding to the origin of replication of Escherichia coli.

Inactivation of Escherichia coli DnaA protein by DNA polymerase III and negative regulations for initiation of chromosomal replication.

ATPase switches controlling DNA replication initiation.

Polymerases and the replisome: machines within machines.

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.

E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration.

Feedback controls restrain the initiation of Escherichia coli chromosomal replication.

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