DELLY: structural variant discovery by integrated paired-end and split-read analysis
about
GROM-RD: resolving genomic biases to improve read depth detection of copy number variantsLUMPY: a probabilistic framework for structural variant discovery.The genomic landscape underlying phenotypic integrity in the face of gene flow in crowsThe genomic and transcriptomic landscape of a HeLa cell lineApplication of whole genome shotgun sequencing for detection and characterization of genetically modified organisms and derived products.Genetic variation and the de novo assembly of human genomesStructural variation discovery in the cancer genome using next generation sequencing: computational solutions and perspectivesActive chromatin and transcription play a key role in chromosome partitioning into topologically associating domains.Looking the cow in the eye: deletion in the NID1 gene is associated with recessive inherited cataract in Romagnola cattleDetection of a recurrent DNAJB1-PRKACA chimeric transcript in fibrolamellar hepatocellular carcinoma.Detection of Genomic Structural Variants from Next-Generation Sequencing DataLong-term culture of genome-stable bipotent stem cells from adult human liverPeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing dataA genome-wide approach for detecting novel insertion-deletion variants of mid-range sizeElucidating emergence and transmission of multidrug-resistant tuberculosis in treatment experienced patients by whole genome sequencingWhole genome sequencing based characterization of extensively drug-resistant Mycobacterium tuberculosis isolates from PakistanIdentifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome SequencingStable recombination hotspots in birdsGenome-Wide Estimates of Mutation Rates and Spectrum in Schizosaccharomyces pombe Indicate CpG Sites are Highly Mutagenic Despite the Absence of DNA MethylationThe genome landscape of the african green monkey kidney-derived vero cell lineExtensive local adaptation within the chemosensory system following Drosophila melanogaster's global expansionBellerophon: a hybrid method for detecting interchromosomal rearrangements at base pair resolution using next-generation sequencing dataPopulation-based structural variation discovery with Hydra-Multi.The Sequences of 1,504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies.MATE-CLEVER: Mendelian-inheritance-aware discovery and genotyping of midsize and long indelsSV-AUTOPILOT: optimized, automated construction of structural variation discovery and benchmarking pipelines.iSVP: an integrated structural variant calling pipeline from high-throughput sequencing dataTruncation and constitutive activation of the androgen receptor by diverse genomic rearrangements in prostate cancer.Re-sequencing transgenic plants revealed rearrangements at T-DNA inserts, and integration of a short T-DNA fragment, but no increase of small mutations elsewherecnvCapSeq: detecting copy number variation in long-range targeted resequencing data.BSSV: Bayesian based somatic structural variation identification with whole genome DNA-seq dataMethods for the detection and assembly of novel sequence in high-throughput sequencing data.Identification of copy number variants in whole-genome data using Reference Coverage Profiles.An integrative framework for the identification of double minute chromosomes using next generation sequencing data.SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data.QuickNGS elevates Next-Generation Sequencing data analysis to a new level of automation.FermiKit: assembly-based variant calling for Illumina resequencing data.Sprites: detection of deletions from sequencing data by re-aligning split reads.An NGS Workflow Blueprint for DNA Sequencing Data and Its Application in Individualized Molecular Oncology.PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities.
P2860
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P2860
DELLY: structural variant discovery by integrated paired-end and split-read analysis
description
2012 nî lūn-bûn
@nan
2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@ast
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@en
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@nl
type
label
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@ast
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@en
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@nl
prefLabel
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@ast
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@en
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@nl
P2860
P50
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P356
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P1476
DELLY: structural variant discovery by integrated paired-end and split-read analysis
@en
P2093
Adrian M Stütz
Andreas Schlattl
P2860
P304
P3181
P356
10.1093/BIOINFORMATICS/BTS378
P407
P577
2012-09-15T00:00:00Z