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Multilocus sequence typing of total-genome-sequenced bacteria

Multilocus sequence typing of total-genome-sequenced bacteria

http://www.wikidata.org/entity/Q24605958

about

Short read sequence typing (SRST): multi-locus sequence types from short reads Integrating genome-based informatics to modernize global disease monitoring, information sharing, and response Advances in Molecular Serotyping and Subtyping of Escherichia coli Whole-genome sequencing targets drug-resistant bacterial infections Expansion of Microbial Forensics Dissemination of cephalosporin resistance genes between Escherichia coli strains from farm animals and humans by specific plasmid lineages Complete-genome sequencing elucidates outbreak dynamics of CA-MRSA USA300 (ST8-spa t008) in an academic hospital of Paramaribo, Republic of Suriname Navigating Microbiological Food Safety in the Era of Whole-Genome Sequencing Whole-genome sequencing in outbreak analysis Comprehensive Genome Analysis of Carbapenemase-Producing Enterobacter spp.: New Insights into Phylogeny, Population Structure, and Resistance Mechanisms.Transforming clinical microbiology with bacterial genome sequencing.Characterization and Genetic Variation of Vibrio cholerae Isolated from Clinical and Environmental Sources in Thailand Resolution of a meningococcal disease outbreak from whole-genome sequence data with rapid Web-based analysis methods.snpTree--a web-server to identify and construct SNP trees from whole genome sequence data.Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus.Salmonella serotype determination utilizing high-throughput genome sequencing data.Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data Application of Whole-Genome Sequencing Data for O-Specific Antigen Analysis and In Silico Serotyping of Pseudomonas aeruginosa Isolates.Using expected sequence features to improve basecalling accuracy of amplicon pyrosequencing data.A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance Environmental emission of multiresistant Escherichia coli carrying the colistin resistance gene mcr-1 from German swine farms.Ribosomal background of the Bacillus cereus group thermotypes.Comprehensive Diagnosis of Bacterial Infection Associated with Acute Cholecystitis Using Metagenomic Approach Comparative genomics of human and non-human Listeria monocytogenes sequence type 121 strains StrainSeeker: fast identification of bacterial strains from raw sequencing reads using user-provided guide trees.The genetic diversity of commensal Escherichia coli strains isolated from non-antimicrobial treated pigs varies according to age group.Ordering the mob: Insights into replicon and MOB typing schemes from analysis of a curated dataset of publicly available plasmids.In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States.Non-Toxin-Producing Bacillus cereus Strains Belonging to the B. anthracis Clade Isolated from the International Space Station.Detection of mcr-1-Carrying Escherichia coli Causing Bloodstream Infection in a New York City Hospital: Avian Origins, Human Concerns?Distinguishing highly-related outbreak-associated Clostridium botulinum type A(B) strains.A Rickettsiella bacterium from the hard tick, Ixodes woodi: molecular taxonomy combining multilocus sequence typing (MLST) with significance testing.Recent advances in understanding enteric pathogenic Escherichia coli.PATRIC, the bacterial bioinformatics database and analysis resource.Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes.Whole genome sequencing in clinical and public health microbiology.SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.High-Throughput Sequencing, a VersatileWeapon to Support Genome-Based Diagnosis in Infectious Diseases: Applications to Clinical Bacteriology WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?

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P2860

Multilocus sequence typing of total-genome-sequenced bacteria

http://www.wikidata.org/entity/Q24605958

description

2012 nî lūn-bûn

@nan

2012 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2012年の論文

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2012年論文

@yue

2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

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name

Multilocus sequence typing of total-genome-sequenced bacteria

@ast

Multilocus sequence typing of total-genome-sequenced bacteria

@en

Multilocus sequence typing of total-genome-sequenced bacteria

@nl

type

label

Multilocus sequence typing of total-genome-sequenced bacteria

@ast

Multilocus sequence typing of total-genome-sequenced bacteria

@en

Multilocus sequence typing of total-genome-sequenced bacteria

@nl

prefLabel

Multilocus sequence typing of total-genome-sequenced bacteria

@ast

Multilocus sequence typing of total-genome-sequenced bacteria

@en

Multilocus sequence typing of total-genome-sequenced bacteria

@nl

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P1433

Journal of Clinical Microbiology

P1476

Multilocus sequence typing of total-genome-sequenced bacteria

@en

P2093

Carsten Friis

http://www.w3.org/2001/XMLSchema#string

Mette V Larsen

http://www.w3.org/2001/XMLSchema#string

P2860

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

GENE SEQUENCING: The Race for the $1000 Genome

Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

Genome sequencing in microfabricated high-density picolitre reactors

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

mlstdbNet - distributed multi-locus sequence typing (MLST) databases

The multilocus sequence typing network: mlst.net.

BTA, a novel reagent for DNA attachment on glass and efficient generation of solid-phase amplified DNA colonies.

Accurate multiplex polony sequencing of an evolved bacterial genome

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1355-61

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scholarly article

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137622

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10.1128/JCM.06094-11

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4

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50

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Thomas Sicheritz-Ponten

David W. Ussery

Simon Rasmussen

Rasmus L Marvig

Salvatore Cosentino

Frank Møller Aarestrup

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2012-04-01T00:00:00Z

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22238442

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3318499

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