RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)
about
P1343
Expression profiling reveals Spot 42 small RNA as a key regulator in the central metabolism of Aliivibrio salmonicidaBSRD: a repository for bacterial small regulatory RNAWisdom of crowds for robust gene network inferenceThe 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database CollectionComparative genomics boosts target prediction for bacterial small RNAsHomotypic clusters of transcription factor binding sites: A model system for understanding the physical mechanics of gene expressionMutation rules and the evolution of sparseness and modularity in biological systemsThe primary transcriptome of the Escherichia coli O104:H4 pAA plasmid and novel insights into its virulence gene expression and regulationMechanisms of mutational robustness in transcriptional regulationData-driven integration of genome-scale regulatory and metabolic network modelsRetroactivity in the Context of Modularly Structured Biomolecular SystemsThe CanOE strategy: integrating genomic and metabolic contexts across multiple prokaryote genomes to find candidate genes for orphan enzymesEnsemble-based network aggregation improves the accuracy of gene network reconstructionGenome-Wide Assessment of Outer Membrane Vesicle Production in Escherichia coliNrdR Transcription Regulation: Global Proteome Analysis and Its Role in Escherichia coli Viability and VirulenceA reproducible approach to high-throughput biological data acquisition and integrationDevelopments in the tools and methodologies of synthetic biologyInferring the relation between transcriptional and posttranscriptional regulation from expression compendiaCoupling between noise and plasticity in E. coliComputational analysis of bacterial RNA-Seq dataCriticality is an emergent property of genetic networks that exhibit evolvabilityMost networks in Wagner's model are cyclingEcoliWiki: a wiki-based community resource for Escherichia coliNetwork deconvolution as a general method to distinguish direct dependencies in networksImproved predictions of transcription factor binding sites using physicochemical features of DNA.HIDEN: Hierarchical decomposition of regulatory networks.Topological effects of data incompleteness of gene regulatory networksTFinDit: transcription factor-DNA interaction data depositoryRegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.The transcription factor titration effect dictates level of gene expression.Robust data-driven incorporation of prior knowledge into the inference of dynamic regulatory networks.dPeak: high resolution identification of transcription factor binding sites from PET and SET ChIP-Seq dataENNET: inferring large gene regulatory networks from expression data using gradient boostingNitrogen assimilation in Escherichia coli: putting molecular data into a systems perspectiveExperimental assessment of static and dynamic algorithms for gene regulation inference from time series expression data.Assessing the effects of data selection and representation on the development of reliable E. coli sigma 70 promoter region predictors.Inferring Broad Regulatory Biology from Time Course Data: Have We Reached an Upper Bound under Constraints Typical of In Vivo Studies?Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities.Gene regulatory network inference using fused LASSO on multiple data setsDirectional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.
P2860
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P2860
RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2011年の論文
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2011年学术文章
@wuu
2011年学术文章
@zh-cn
2011年学术文章
@zh-hans
2011年学术文章
@zh-my
2011年学术文章
@zh-sg
2011年學術文章
@yue
name
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@ast
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@en
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@nl
type
label
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@ast
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@en
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@nl
prefLabel
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@ast
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@en
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@nl
P2093
P2860
P50
P3181
P356
P1476
RegulonDB version 7.0: transcr ...... response units (Gensor Units)
@en
P2093
Alberto Santos-Zavaleta
Alejandra López-Fuentes
Alejandra Medina-Rivera
Alfredo Mendoza-Vargas
Araceli M Huerta
César Bonavides-Martínez
Heladia Salgado
Hilda Solano-Lira
Irma Martínez-Flores
Jair S García-Sotelo
P2860
P304
P3181
P356
10.1093/NAR/GKQ1110
P407
P433
Database issue
P577
2011-01-01T00:00:00Z