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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

http://www.wikidata.org/entity/Q24629701

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A role for the bacterial GATC methylome in antibiotic stress survival Genomic and functional characteristics of human cytomegalovirus revealed by next-generation sequencing The Epigenomic Landscape of Prokaryotes Recent "omics" advances in Helicobacter pylori.DNA methylation on N(6)-adenine in mammalian embryonic stem cells.A comparative analysis of methylome profiles of Campylobacter jejuni sheep abortion isolate and gastroenteric strains using PacBio data.Sequence data for Clostridium autoethanogenum using three generations of sequencing technologies.Implementation and Data Analysis of Tn-seq, Whole-Genome Resequencing, and Single-Molecule Real-Time Sequencing for Bacterial Genetics.Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling.Unlocking the mystery of the hard-to-sequence phage genome: PaP1 methylome and bacterial immunity Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae.Specificity of the ModA11, ModA12 and ModD1 epigenetic regulator N(6)-adenine DNA methyltransferases of Neisseria meningitidis.Epigenetics, Darwin, and Lamarck The genomic landscape of the verrucomicrobial methanotroph Methylacidiphilum fumariolicum SolV.Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars.Genome Modification in Enterococcus faecalis OG1RF Assessed by Bisulfite Sequencing and Single-Molecule Real-Time Sequencing.Epigenetic Segregation of Microbial Genomes from Complex Samples Using Restriction Endonucleases HpaII and McrB.Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite- sequencing Complete genome sequence of Salinicoccus halodurans H3B36, isolated from the Qaidam Basin in China.CRISPR-Cas and Restriction-Modification Act Additively against Conjugative Antibiotic Resistance Plasmid Transfer in Enterococcus faecalis.Complete telomere-to-telomere de novo assembly of the Plasmodium falciparum genome through long-read (>11 kb), single molecule, real-time sequencing.MethSMRT: an integrative database for DNA N6-methyladenine and N4-methylcytosine generated by single-molecular real-time sequencing.The functions of DNA methylation by CcrM in Caulobacter crescentus: a global approach.Type I restriction enzymes and their relatives.Bacterial DNA Methylation and Methylomes.Methods for Genome-Wide Methylome Profiling of Campylobacter jejuni.Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes Chromosome and Megaplasmid Sequences of Borrelia anserina (Sakharoff 1891), the Agent of Avian Spirochetosis and Type Species of the Genus.Returning to more finished genomes.Design of synthetic epigenetic circuits featuring memory effects and reversible switching based on DNA methylation Restriction-modification mediated barriers to exogenous DNA uptake and incorporation employed by Prevotella intermedia.iDNA4mC: identifying DNA N4-methylcytosine sites based on nucleotide chemical properties.Mapping DNA methylation with high-throughput nanopore sequencing.A world of opportunities with nanopore sequencing.Application of next-generation sequencing methods for microbial monitoring of anaerobic digestion of lignocellulosic biomass.Phasevarions of Bacterial Pathogens: Methylomics Sheds New Light on Old Enemies.Genomic sequencing of Neisseria gonorrhoeae to respond to the urgent threat of antimicrobial-resistant gonorrhea.Complete Genome Sequence of the Poly-γ-Glutamate-Synthesizing Bacterium Bacillus subtilis Bs-115.

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

http://www.wikidata.org/entity/Q24629701

description

2013 nî lūn-bûn

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2013 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2013 թվականի ապրիլին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

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J.MIB.2013.01.011

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Current Opinion in Microbiology

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Entering the era of bacterial epigenomics with single molecule real time DNA sequencing

@en

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Brigid M Davis

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Matthew K Waldor

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Michael C Chao

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Direct detection and sequencing of damaged DNA bases

Base J: Discovery, Biosynthesis, and Possible Functions

Direct detection of methylation in genomic DNA

Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases

The methylomes of six bacteria.

Glucosylated hydroxymethyluracil, DNA base J, prevents transcriptional readthrough in Leishmania

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

The DNA (cytosine-5) methyltransferases

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes

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