Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
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Augmenting transcriptome assembly by combining de novo and genome-guided toolsDevelopment and Characterization of Bladder Cancer Patient-Derived Xenografts for Molecularly Guided Targeted TherapyTranscription factors OVOL1 and OVOL2 induce the mesenchymal to epithelial transition in human cancerSystematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq dataThe vast, conserved mammalian lincRNomeA bioinformatics approach reveals novel interactions of the OVOL transcription factors in the regulation of epithelial - mesenchymal cell reprogramming and cancer progressionDifferential gene expression and alternative splicing in insect immune specificityAn extensive evaluation of read trimming effects on Illumina NGS data analysisChronic cocaine-regulated epigenomic changes in mouse nucleus accumbens.The genomic landscape underlying phenotypic integrity in the face of gene flow in crowsThe landscape of long noncoding RNAs in the human transcriptomeGenome and transcriptome of the porcine whipworm Trichuris suisThe Capsella rubella genome and the genomic consequences of rapid mating system evolutionThe octopus genome and the evolution of cephalopod neural and morphological noveltiesA physical, genetic and functional sequence assembly of the barley genomeN(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactionsC2orf62 and TTC17 are involved in actin organization and ciliogenesis in zebrafish and humanThe ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragmentsComparative performance of transcriptome assembly methods for non-model organismsBluetongue Virus NS4 Protein Is an Interferon Antagonist and a Determinant of Virus VirulenceMolecular signatures associated with ZIKV exposure in human cortical neural progenitorsPractical aspects of NGS-based pathways analysis for personalized cancer science and medicineTranscriptome Analysis in Domesticated Species: Challenges and StrategiesAnalysis of Whole Transcriptome Sequencing Data: Workflow and SoftwareDynamics in Transcriptomics: Advancements in RNA-seq Time Course and Downstream AnalysisSurvey of Programs Used to Detect Alternative Splicing Isoforms from Deep Sequencing Data In SilicoGenetic Susceptibility to Rhodococcus equiThe expanding genetic toolbox of the wasp Nasonia vitripennis and its relativesSequencing quality assessment tools to enable data-driven informatics for high throughput genomicsMassively parallel sequencing: the new frontier of hematologic genomicsUse of RNA sequencing to evaluate rheumatic disease patientsPreparation of Single-Cell RNA-Seq Libraries for Next Generation SequencingAdvanced Applications of RNA Sequencing and ChallengesGene expression defines natural changes in mammalian lifespanIntroduction to sequencing the brain transcriptomeCis-Natural Antisense Transcripts Are Mainly Co-expressed with Their Sense Transcripts and Primarily Related to Energy Metabolic Pathways during Muscle Development.Assessing Dissimilarity Measures for Sample-Based Hierarchical Clustering of RNA Sequencing Data Using Plasmode DatasetsImmunological Response to Single Pathogen Challenge with Agents of the Bovine Respiratory Disease Complex: An RNA-Sequence Analysis of the Bronchial Lymph Node TranscriptomeChronic Replication Problems Impact Cell Morphology and Adhesion of DNA Ligase I Defective CellsLactic acid is a sperm motility inactivation factor in the sperm storage tubules
P2860
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P2860
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
description
2012 nî lūn-bûn
@nan
2012 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի մարտին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Differential gene and transcri ...... ents with TopHat and Cufflinks
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Differential gene and transcri ...... ents with TopHat and Cufflinks
@en
Differential gene and transcri ...... ents with TopHat and Cufflinks
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type
label
Differential gene and transcri ...... ents with TopHat and Cufflinks
@ast
Differential gene and transcri ...... ents with TopHat and Cufflinks
@en
Differential gene and transcri ...... ents with TopHat and Cufflinks
@nl
prefLabel
Differential gene and transcri ...... ents with TopHat and Cufflinks
@ast
Differential gene and transcri ...... ents with TopHat and Cufflinks
@en
Differential gene and transcri ...... ents with TopHat and Cufflinks
@nl
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Differential gene and transcri ...... ents with TopHat and Cufflinks
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Adam Roberts
Cole Trapnell
Daehwan Kim
David R Kelley
Geo Pertea
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10.1038/NPROT.2012.016
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2012-03-01T00:00:00Z
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1030124536