CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data - Wikidata - wikimedia - TriplyDB

CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data

CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data

http://www.wikidata.org/entity/Q24646326

about

SHIFTX2: significantly improved protein chemical shift prediction SPARTA+: a modest improvement in empirical NMR chemical shift prediction by means of an artificial neural network TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts Predicting continuous local structure and the effect of its substitution for secondary structure in fragment-free protein structure prediction GeNMR: a web server for rapid NMR-based protein structure determination The AUDANA algorithm for automated protein 3D structure determination from NMR NOE data.Synergy of NMR, Computation, and X-Ray Crystallography for Structural Biology Structural and Thermodynamic Characterization of Vibrio fischeri CcdB A transient and low-populated protein-folding intermediate at atomic resolution Nonnative Interactions in the FF Domain Folding Pathway from an Atomic Resolution Structure of a Sparsely Populated Intermediate: An NMR Relaxation Dispersion Study Solution NMR of a 463-residue phosphohexomutase: domain 4 mobility, substates, and phosphoryl transfer defect.Primary Identification, Biochemical Characterization, and Immunologic Properties of the Allergenic Pollen Cyclophilin Cat r 1 The prokaryotic zinc-finger: structure, function and comparison with the eukaryotic counterpart A progesterone receptor co-activator (JDP2) mediates activity through interaction with residues in the carboxyl-terminal extension of the DNA binding domain NMRDSP: an accurate prediction of protein shape strings from NMR chemical shifts and sequence data Performance of the WeNMR CS-Rosetta3 web server in CASD-NMR Structure-function analysis of a broad specificity Populus trichocarpa endo-β-glucanase reveals an evolutionary link between bacterial licheninases and plant XTH gene products Prediction of Protein Structure Using Surface Accessibility Data Backbone assignment and secondary structure of the PsbQ protein from photosystem II ASTRO-FOLD 2.0: an Enhanced Framework for Protein Structure Prediction A unified NMR strategy for high-throughput determination of backbone fold of small proteins.One contact for every twelve residues allows robust and accurate topology-level protein structure modeling Membrane protein structure determination: back to the membrane.RASP: rapid and robust backbone chemical shift assignments from protein structure.CSI 2.0: a significantly improved version of the Chemical Shift Index.NMR data-driven structure determination using NMR-I-TASSER in the CASD-NMR experiment.De novo protein structure generation from incomplete chemical shift assignments.PPM_One: a static protein structure based chemical shift predictor.Relationship between chemical shift value and accessible surface area for all amino acid atoms.Energy landscapes of a hairpin peptide including NMR chemical shift restraints.A robust algorithm for optimizing protein structures with NMR chemical shifts.De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds PROSESS: a protein structure evaluation suite and server Advances in automated NMR protein structure determination.Trends in template/fragment-free protein structure prediction Nuclear magnetic resonance signal chemical shifts and molecular simulations: a multidisciplinary approach to modeling copper protein structures.Chemical shift prediction for protein structure calculation and quality assessment using an optimally parameterized force field.Blind testing of routine, fully automated determination of protein structures from NMR data Rapid calculation of protein chemical shifts using bond polarization theory and its application to protein structure refinement.Protein structure prediction using global optimization by basin-hopping with NMR shift restraints.

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CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data

http://www.wikidata.org/entity/Q24646326

description

2008 nî lūn-bûn

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2008 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի հուլիսին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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name

CS23D: a web server for rapid ...... mical shifts and sequence data

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CS23D: a web server for rapid ...... mical shifts and sequence data

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CS23D: a web server for rapid ...... mical shifts and sequence data

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CS23D: a web server for rapid ...... mical shifts and sequence data

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Nucleic Acids Research

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CS23D: a web server for rapid ...... mical shifts and sequence data

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P2093

David Arndt

http://www.w3.org/2001/XMLSchema#string

Guohui Lin

http://www.w3.org/2001/XMLSchema#string

Jianjun Zhou

http://www.w3.org/2001/XMLSchema#string

Mark Berjanskii

http://www.w3.org/2001/XMLSchema#string

Peter Tang

http://www.w3.org/2001/XMLSchema#string

P2860

The RCSB PDB information portal for structural genomics.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Consistent blind protein structure generation from NMR chemical shift data

PREDITOR: a web server for predicting protein torsion angle restraints

The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium

Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions

Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS

Automated assignment of ambiguous nuclear overhauser effects with ARIA

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W496-502

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scholarly article

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1697595

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10.1093/NAR/GKN305

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Web Server issue

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P478

36

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David S Wishart

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2008-07-01T00:00:00Z

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5336362

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P698

18515350

http://www.w3.org/2001/XMLSchema#string

P921

protein structure

P932

2447725

http://www.w3.org/2001/XMLSchema#string