The effects of normalization on the correlation structure of microarray data
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Assessing stability of gene selection in microarray data analysis.Strategic applications of gene expression: from drug discovery/development to bedsideWeighted-SAMGSR: combining significance analysis of microarray-gene set reduction algorithm with pathway topology-based weights to select relevant genesComparative analysis of microarray normalization procedures: effects on reverse engineering gene networksA nitty-gritty aspect of correlation and network inference from gene expression dataFalse discovery rate control in two-stage designs.Identification of human HK genes and gene expression regulation study in cancer from transcriptomics data analysis.Comments on 'Bayesian hierarchical error model for analysis of gene expression data'.Study design and data analysis considerations for the discovery of prognostic molecular biomarkers: a case study of progression free survival in advanced serous ovarian cancer.How high is the level of technical noise in microarray data?Revisiting adverse effects of cross-hybridization in Affymetrix gene expression data: do they matter for correlation analysis?The properties of high-dimensional data spaces: implications for exploring gene and protein expression data.Discovery of agents that eradicate leukemia stem cells using an in silico screen of public gene expression data.Empirical study of supervised gene screeningFalse discovery rate paradigms for statistical analyses of microarray gene expression data.Peripheral arterial occlusive disease: global gene expression analyses suggest a major role for immune and inflammatory responses.Detecting intergene correlation changes in microarray analysis: a new approach to gene selection.Comments on the analysis of unbalanced microarray data.Refining gene signatures: a Bayesian approach.Analysis and computational dissection of molecular signature multiplicityA new gene selection procedure based on the covariance distance.Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering.Pathway analysis of expression data: deciphering functional building blocks of complex diseases.Reproducible cancer biomarker discovery in SELDI-TOF MS using different pre-processing algorithms.Extensive up-regulation of gene expression in cancer: the normalised use of microarray data.Evaluating reproducibility of differential expression discoveries in microarray studies by considering correlated molecular changes.Large datasets in biomedicine: a discussion of salient analytic issues.Why is it so difficult to data mine relevant genome-scale biomarkers?The impact of quantile and rank normalization procedures on the testing power of gene differential expression analysisMixed-model coexpression: calculating gene coexpression while accounting for expression heterogeneity.Evaluation of bias-variance trade-off for commonly used post-summarizing normalization procedures in large-scale gene expression studies.Nonlinear dependence in the discovery of differentially expressed genes.Systematic noise degrades gene co-expression signals but can be corrected.Is there an alternative to increasing the sample size in microarray studies?Identification of reproducible drug-resistance-related dysregulated genes in small-scale cancer cell line experiments.An empirical Bayesian approach for identifying differential coexpression in high-throughput experiments.Utility of correlation measures in analysis of gene expression.Effect of normalization on statistical and biological interpretation of gene expression profiles.Sample size reassessment for a two-stage design controlling the false discovery rate.An efficient method to identify differentially expressed genes in microarray experiments.
P2860
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P2860
The effects of normalization on the correlation structure of microarray data
description
2005 nî lūn-bûn
@nan
2005 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
The effects of normalization on the correlation structure of microarray data
@ast
The effects of normalization on the correlation structure of microarray data
@en
The effects of normalization on the correlation structure of microarray data
@nl
type
label
The effects of normalization on the correlation structure of microarray data
@ast
The effects of normalization on the correlation structure of microarray data
@en
The effects of normalization on the correlation structure of microarray data
@nl
prefLabel
The effects of normalization on the correlation structure of microarray data
@ast
The effects of normalization on the correlation structure of microarray data
@en
The effects of normalization on the correlation structure of microarray data
@nl
P2093
P2860
P3181
P356
P1433
P1476
The effects of normalization on the correlation structure of microarray data
@en
P2093
Andrew I Brooks
Ndrei Yakovlev
P2860
P2888
P3181
P356
10.1186/1471-2105-6-120
P407
P50
P577
2005-05-16T00:00:00Z
P5875
P6179
1023687329