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EXPANDER--an integrative program suite for microarray data analysis

EXPANDER--an integrative program suite for microarray data analysis

http://www.wikidata.org/entity/Q24814200

about

Identification of functional modules using network topology and high-throughput data.Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks FABIA: factor analysis for bicluster acquisition Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future Innate killing of Leishmania donovani by macrophages of the splenic marginal zone requires IRF-7 Activation of inflammation/NF-kappaB signaling in infants born to arsenic-exposed mothers Revealing system-level correlations between aging and calorie restriction using a mouse transcriptome Automated discovery of functional generality of human gene expression programs Prenatal arsenic exposure alters gene expression in the adult liver to a proinflammatory state contributing to accelerated atherosclerosis Importance of correlation between gene expression levels: application to the type I interferon signature in rheumatoid arthritis Molecular signatures of the primitive prostate stem cell niche reveal novel mesenchymal-epithelial signaling pathways GOAL: a software tool for assessing biological significance of genes groups.Characterization of AKT independent effects of the synthetic AKT inhibitors SH-5 and SH-6 using an integrated approach combining transcriptomic profiling and signaling pathway perturbations (Not) Keeping the stem straight: a proteomic analysis of maritime pine seedlings undergoing phototropism and gravitropism.BirdsEyeView (BEV): graphical overviews of experimental data.Identifying in-trans process associated genes in breast cancer by integrated analysis of copy number and expression data An unsupervised approach to predict functional relations between genes based on expression data.Determinants of protein abundance and translation efficiency in S. cerevisiae Uncovering packaging features of co-regulated modules based on human protein interaction and transcriptional regulatory networks STEM: a tool for the analysis of short time series gene expression data.Genome Expression Pathway Analysis Tool--analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context.Relating gene expression data on two-component systems to functional annotations in Escherichia coli Practical strategies for discovering regulatory DNA sequence motifs.Signalling pathways involved in adult heart formation revealed by gene expression profiling in Drosophila Functional genomic delineation of TLR-induced transcriptional networks.Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology SPIKE--a database, visualization and analysis tool of cellular signaling pathways.Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue.Extracting expression modules from perturbational gene expression compendia.A genome-wide gene expression signature of environmental geography in leukocytes of Moroccan Amazighs.DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites.Molecular signatures of prostate stem cells reveal novel signaling pathways and provide insights into prostate cancer QUBIC: a qualitative biclustering algorithm for analyses of gene expression data Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network CGI: Java software for mapping and visualizing data from array-based comparative genomic hybridization and expression profiling Comparative community genomics in the Dead Sea: an increasingly extreme environment.Understanding gene sequence variation in the context of transcription regulation in yeast.CHK2 is involved in the p53-independent radiosensitizing effects of valproic acid.Tumorigenic WAP-T mouse mammary carcinoma cells: a model for a self-reproducing homeostatic cancer cell system.

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P2860

EXPANDER--an integrative program suite for microarray data analysis

http://www.wikidata.org/entity/Q24814200

description

2005 nî lūn-bûn

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2005 թուականին հրատարակուած գիտական յօդուած

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2005 թվականին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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type

label

EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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prefLabel

EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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EXPANDER--an integrative program suite for microarray data analysis

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1471-2105-6-232

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BMC Bioinformatics

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EXPANDER--an integrative program suite for microarray data analysis

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Adi Maron-Katz

http://www.w3.org/2001/XMLSchema#string

Amos Tanay

http://www.w3.org/2001/XMLSchema#string

Chaim Linhart

http://www.w3.org/2001/XMLSchema#string

Israel Steinfeld

http://www.w3.org/2001/XMLSchema#string

Ran Elkon

http://www.w3.org/2001/XMLSchema#string

Ron Shamir

http://www.w3.org/2001/XMLSchema#string

Yosef Shiloh

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P2860

Gene ontology: tool for the unification of biology

Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data

Cluster analysis and display of genome-wide expression patterns

Entrez Gene: gene-centered information at NCBI

WormBase: a comprehensive data resource for Caenorhabditis biology and genomics

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters.

Systematic determination of genetic network architecture

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

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232

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208679

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10.1186/1471-2105-6-232

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1261157

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