TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase - Wikidata - wikimedia - TriplyDB

TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

http://www.wikidata.org/entity/Q25256702

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The frontier between cell and organelle: genome analysis of Candidatus Carsonella ruddii Genome evolution and phylogenomic analysis of Candidatus Kinetoplastibacterium, the betaproteobacterial endosymbionts of Strigomonas and Angomonas tRNADB-CE: tRNA gene database curated manually by experts Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos Evolutionary conservation of a functionally important backbone phosphate group critical for aminoacylation of histidine tRNAs.Small but powerful, the primary endosymbiont of moss bugs, Candidatus Evansia muelleri, holds a reduced genome with large biosynthetic capabilities tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria Bioinformatic Analysis Reveals Archaeal tRNATyr and tRNATrp Identities in Bacteria.Computational analysis of tRNA identity.Complete genome of the broad-host-range Erwinia amylovora phage phiEa21-4 and its relationship to Salmonella phage felix O1.Transfer RNAs with novel cloverleaf structures.Template-dependent 3'-5' nucleotide addition is a shared feature of tRNAHis guanylyltransferase enzymes from multiple domains of life The requirement for the highly conserved G-1 residue of Saccharomyces cerevisiae tRNAHis can be circumvented by overexpression of tRNAHis and its synthetase.3'-5' tRNAHis guanylyltransferase in bacteria.Change of tRNA identity leads to a divergent orthogonal histidyl-tRNA synthetase/tRNAHis pair Suppression of amber codons in Caulobacter crescentus by the orthogonal Escherichia coli histidyl-tRNA synthetase/tRNAHis pair Life without post-transcriptional addition of G-1: two alternatives for tRNAHis identity in Eukarya tRNAHis-guanylyltransferase establishes tRNAHis identity Loss of a universal tRNA feature tRNA acceptor stem and anticodon bases form independent codes related to protein folding.Doing it in reverse: 3'-to-5' polymerization by the Thg1 superfamily.Initiator tRNA genes template the 3' CCA end at high frequencies in bacteria.Absence of a universal element for tRNAHis identity in Acanthamoeba castellanii.A Microbial Metagenome (Leucobacter sp.) in Caenorhabditis Whole Genome Sequences.On the evolution and expression of Chlamydomonas reinhardtii nucleus-encoded transfer RNA genes.tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.Diversity and similarity in the tRNA world: overall view and case study on malaria-related tRNAs.From end to end: tRNA editing at 5'- and 3'-terminal positions.Differential annotation of tRNA genes with anticodon CAT in bacterial genomes Anticodon-dependent conservation of bacterial tRNA gene sequences.Protein-only RNase P function in Escherichia coli: viability, processing defects and differences between PRORP isoenzymes.Evolution of tRNA Repertoires in Bacillus Inferred with OrthoAlign.Repairing tRNA termini: News from the 3' end.tRNA anticodon shifts in eukaryotic genomes.Stable tRNA-based phylogenies using only 76 nucleotides.Mapping hidden potential identity elements by computing the average discriminating power of individual tRNA positions.TFAM 1.0: an online tRNA function classifier.Kinetic discrimination of tRNA identity by the conserved motif 2 loop of a class II aminoacyl-tRNA synthetase.Coding of Class I and II Aminoacyl-tRNA Synthetases.Evolutionary gain of highly divergent tRNA specificities by two isoforms of human histidyl-tRNA synthetase.

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P2860

TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

http://www.wikidata.org/entity/Q25256702

description

2006 nî lūn-bûn

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2006 թուականին հրատարակուած գիտական յօդուած

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2006 թվականին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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2006年论文

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name

TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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type

label

TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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prefLabel

TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

@en

TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

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Nucleic Acids Research

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TFAM detects co-evolution of t ...... er of histidyl-tRNA synthetase

@en

P2093

David H Ardell

http://www.w3.org/2001/XMLSchema#string

Siv G E Andersson

http://www.w3.org/2001/XMLSchema#string

P2860

The COG database: an updated version includes eukaryotes

Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae

The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4

Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

rRNA promoter activity in the fast-growing bacterium Vibrio natriegens

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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893-904

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1684131

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10.1093/NAR/GKJ449

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3

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34

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2006-01-01T00:00:00Z

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7302541

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16473847

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1363771

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