Bioinformatic and Physical Characterizations of Genome-Scale Ordered RNA Structure in Mammalian RNA Viruses - Wikidata - wikimedia - TriplyDB

Bioinformatic and Physical Characterizations of Genome-Scale Ordered RNA Structure in Mammalian RNA Viruses

Bioinformatic and Physical Characterizations of Genome-Scale Ordered RNA Structure in Mammalian RNA Viruses

http://www.wikidata.org/entity/Q27487338

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Serology-enabled discovery of genetically diverse hepaciviruses in a new host Cis-acting RNA elements in human and animal plus-strand RNA viruses Computational tools and algorithms for designing customized synthetic genes A Discontinuous RNA Platform Mediates RNA Virus Replication: Building an Integrated Model for RNA–based Regulation of Viral Processes Global organization of a positive-strand RNA virus genome Analysis of serine codon conservation reveals diverse phenotypic constraints on hepatitis C virus glycoprotein evolution Large-scale screening and characterization of enteroviruses and kobuviruses infecting pigs in Vietnam Genetic diversity of near genome-wide hepatitis C virus sequences during chronic infection: evidence for protein structural conservation over time.Replication of many human viruses is refractory to inhibition by endogenous cellular microRNAs.Complex recombination patterns arising during geminivirus coinfections preserve and demarcate biologically important intra-genome interaction networks.Comparison of the Mechanisms of Drug Resistance among HIV, Hepatitis B, and Hepatitis C.The natural history of non-human GB virus C in captive chimpanzees.Synonymous mutations reduce genome compactness in icosahedral ssRNA viruses.Influenza B virus has global ordered RNA structure in (+) and (-) strands but relatively less stable predicted RNA folding free energy than allowed by the encoded protein sequence.Clinical isolates of Trichomonas vaginalis concurrently infected by strains of up to four Trichomonasvirus species (Family Totiviridae)Ribonuclease L and metal-ion-independent endoribonuclease cleavage sites in host and viral RNAs.Recombination in enteroviruses is a biphasic replicative process involving the generation of greater-than genome length 'imprecise' intermediates Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context Functionally conserved architecture of hepatitis C virus RNA genomes.Visualizing the global secondary structure of a viral RNA genome with cryo-electron microscopy.RNA-RNA and RNA-protein interactions in coronavirus replication and transcription Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses Evaluation of Viremia Frequencies of a Novel Human Pegivirus by Using Bioinformatic Screening and PCR Synonymous Co-Variation across the E1/E2 Gene Junction of Hepatitis C Virus Defines Virion Fitness In silico discovery and modeling of non-coding RNA structure in viruses.Low-Fidelity Polymerases of Alphaviruses Recombine at Higher Rates To Overproduce Defective Interfering Particles.MicroRNAs as mediators of viral evasion of the immune system.How do viruses avoid inhibition by endogenous cellular microRNAs?Progress and outlook in structural biology of large viral RNAs.The influence of viral RNA secondary structure on interactions with innate host cell defences.cis-Acting RNA elements in the hepatitis C virus RNA genome.Inhibition of HCV translation by disrupting the structure and interactions of the viral CRE and 3' X-tail.A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication.Antiviral RNA interference responses induced by Semliki Forest virus infection of mosquito cells: characterization, origin, and frequency-dependent functions of virus-derived small interfering RNAs The Coding Region of the HCV Genome Contains a Network of Regulatory RNA Structures.The chaperone-like activity of the hepatitis C virus IRES and CRE elements regulates genome dimerization.Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain Influence of genome-scale RNA structure disruption on the replication of murine norovirus--similar replication kinetics in cell culture but attenuation of viral fitness in vivo.Long-range architecture in a viral RNA genome On the role of four small hairpins in the HIV-1 RNA genome.

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Bioinformatic and Physical Characterizations of Genome-Scale Ordered RNA Structure in Mammalian RNA Viruses

http://www.wikidata.org/entity/Q27487338

description

2008 nî lūn-bûn

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2008 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

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2008 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Bioinformatic and Physical Cha ...... cture in Mammalian RNA Viruses

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Journal of Virology

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Bioinformatic and physical cha ...... cture in mammalian RNA viruses

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John P Pezacki

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Matthew Davis

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P2860

Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

Identification of a cis-acting replication element within the poliovirus coding region

The V proteins of paramyxoviruses bind the IFN-inducible RNA helicase, mda-5, and inhibit its activation of the IFN-beta promoter

The European ribosomal RNA database

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures

DINAMelt web server for nucleic acid melting prediction.

Full-length GB virus C (Hepatitis G virus) RNA transcripts are infectious in primary CD4-positive T cells

Structural constraints on RNA virus evolution

Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence.

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11824-11836

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4950500

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10.1128/JVI.01078-08

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23

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82

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18799591

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2583674

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