A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs - Wikidata - wikimedia - TriplyDB

A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

http://www.wikidata.org/entity/Q27658210

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A universal code for RNA recognition by PUF proteins Specific and Modular Binding Code for Cytosine Recognition in Pumilio/FBF (PUF) RNA-binding Domains Stacking interactions in PUF-RNA complexes Alternate Modes of Cognate RNA Recognition by Human PUMILIO Proteins Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site Divergent RNA binding specificity of yeast Puf2p.Identification of a conserved interface between PUF and CPEB proteins Integration of Posttranscriptional Gene Networks into Metabolic Adaptation and Biofilm Maturation in Candida albicans Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces Nop9 binds the central pseudoknot region of 18S rRNA The Puf RNA-binding proteins FBF-1 and FBF-2 inhibit the expression of synaptonemal complex proteins in germline stem cells.A protein-RNA specificity code enables targeted activation of an endogenous human transcript Harnessing natural sequence variation to dissect posttranscriptional regulatory networks in yeast Development of thyroglobulin antibodies after GVAX immunotherapy is associated with prolonged survival Finding the target sites of RNA-binding proteins.Nucleic acid recognition by tandem helical repeats.A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.The trypanosome Pumilio domain protein PUF5.Probing RNA-protein networks: biochemistry meets genomics Conditional regulation of Puf1p, Puf4p, and Puf5p activity alters YHB1 mRNA stability for a rapid response to toxic nitric oxide stress in yeast.Targeted translational regulation using the PUF protein family scaffold.Glucose-Regulated Phosphorylation of the PUF Protein Puf3 Regulates the Translational Fate of Its Bound mRNAs and Association with RNA Granules.Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity RNA regulatory networks diversified through curvature of the PUF protein scaffold.Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p A Nucleolar PUF RNA-binding Protein with Specificity for a Unique RNA Sequence.Protein-RNA networks revealed through covalent RNA marks De-coding and re-coding RNA recognition by PUF and PPR repeat proteins.A protein.protein interaction platform involved in recruitment of GLD-3 to the FBF.fem-3 mRNA complex.The PUF binding landscape in metazoan germ cells.Engineered proteins with Pumilio/fem-3 mRNA binding factor scaffold to manipulate RNA metabolism.Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.Carbon source-dependent alteration of Puf3p activity mediates rapid changes in the stabilities of mRNAs involved in mitochondrial function.Roles of Puf proteins in mRNA degradation and translation.Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins.Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure.Engineering reprogrammable RNA-binding proteins for study and manipulation of the transcriptome.Integrated analysis of RNA-binding protein complexes using in vitro selection and high-throughput sequencing and sequence specificity landscapes (SEQRS).

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P2860

A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

http://www.wikidata.org/entity/Q27658210

description

2009 nî lūn-bûn

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2009 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

@zh-hk

2009年論文

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2009年論文

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2009年论文

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name

A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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prefLabel

A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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PNAS.0812079106

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Proceedings of the National Academy of Sciences of the United States of America

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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs

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Craig R Stumpf

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Deyu Zhu

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Joseph M Krahn

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Marvin Wickens

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P2860

Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast

Comparative analysis of mRNA targets for human PUF-family proteins suggests extensive interaction with the miRNA regulatory system

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

Improved methods for building protein models in electron density maps and the location of errors in these models

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Processing of X-ray diffraction data collected in oscillation mode

Yeast mitochondrial biogenesis: a role for the PUF RNA-binding protein Puf3p in mRNA localization

Structure of Pumilio reveals similarity between RNA and peptide binding motifs

Crystal structure of a Pumilio homology domain

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20192-20197

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scholarly article

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4352687

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10.1073/PNAS.0812079106

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2009-11-16T00:00:00Z

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19918084

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2787145

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