Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H–13C residual dipolar coupling on refinement
about
Structure of a Conserved Retroviral RNA Packaging Element by NMR Spectroscopy and Cryo-Electron TomographySolution structure of an alternate conformation of helix27 from Escherichia coli16S rRNAMolecular dynamics re-refinement of two different small RNA loop structures using the original NMR data suggest a common structureDetermination of the conformational ensemble of the TAR RNA by X-ray scattering interferometry.Measurement of (1)H-(15)N and (1)H-(13)C residual dipolar couplings in nucleic acids from TROSY intensities.Conserved sequence-specific lincRNA-steroid receptor interactions drive transcriptional repression and direct cell fate.Conjoined use of EM and NMR in RNA structure refinement.New insights into the fundamental role of topological constraints as a determinant of two-way junction conformationRNA structure. Structure of the HIV-1 RNA packaging signal.NMR detection of structures in the HIV-1 5'-leader RNA that regulate genome packagingPrediction of hydrogen and carbon chemical shifts from RNA using database mining and support vector regression.Solution Structure of the HIV-1 Intron Splicing Silencer and Its Interactions with the UP1 Domain of Heterogeneous Nuclear Ribonucleoprotein (hnRNP) A1Database proton NMR chemical shifts for RNA signal assignment and validation.Utility of 1H NMR chemical shifts in determining RNA structure and dynamicsThe RNA 3D Motif Atlas: Computational methods for extraction, organization and evaluation of RNA motifs.Coarse grained models reveal essential contributions of topological constraints to the conformational free energy of RNA bulges.Structure determination of noncanonical RNA motifs guided by ¹H NMR chemical shifts.Progress and outlook in structural biology of large viral RNAs.Double-stranded RNA-binding artificial cationic oligosaccharides stabilizing siRNAs with a low N/P ratio.G-triplex structure and formation propensity.Refinement of the Cornell et al. Nucleic Acids Force Field Based on Reference Quantum Chemical Calculations of Glycosidic Torsion Profiles.How do ADARs bind RNA? New protein-RNA structures illuminate substrate recognition by the RNA editing ADARs.Twenty-five years of nucleic acid simulationsHnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.Measuring Residual Dipolar Couplings in Excited Conformational States of Nucleic Acids by CEST NMR Spectroscopy.All-atom crystal simulations of DNA and RNA duplexes.Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach.Artificial cationic oligosaccharides for heteroduplex oligonucleotide-type drugs.Influence of Na+ and Mg2+ ions on RNA structures studied with molecular dynamics simulations.High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraintsHIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry
P2860
Q27664955-6C41D839-69B1-48D4-B698-070C68895A0FQ27667336-A6538FC7-5184-4E23-BAA0-324E74D356C6Q27681249-B9736956-7D66-4342-9249-85C6559E4B6CQ33636112-8852DCE7-54C9-4DEE-A5C9-C53C53038DDBQ34030656-A4C402C3-2A22-4A1B-ABFF-6FEABB09A51FQ34789303-498BDFFC-EC1E-43F4-9649-8BEFB01F8B14Q35209560-612ECC1E-1B22-4272-A69E-BF9F5E282813Q35672239-4C7BAEA5-C01E-420F-B94D-296A4022BEF9Q35820838-D3FADD63-F414-4A0E-83A8-45B36251C859Q35909166-7521108B-CE32-4756-8A39-D53D7A78718AQ36345232-7CFCEBAB-967A-4409-A130-FC7DDBDB9C25Q36518316-90611EF7-0B08-440C-8D99-1BE22E1A7E41Q36563390-55668F78-6423-41CD-AB99-A07EAC6A3CCAQ36914081-07C54FB2-EA77-4B8C-ADF7-1F428E3D95EBQ37038739-778DED48-2D9E-4E82-A13E-711DE4BC07DCQ37697428-2FB545EA-7CD8-4C4B-B788-C40554E44EC8Q37701034-04F54A78-C33B-4FB5-852F-409DF8C35947Q38222525-84008E13-4DFD-427E-94A3-F59FA47CAF41Q38289241-7730C097-1747-47F7-8570-CE6D24B7BBBCQ38303179-ABC7D98A-65C3-4B91-9FB6-A5E1ACFEDB65Q38389887-2F918D05-CCF1-49E1-A4A2-47621342535FQ39144080-61162908-58D5-4A94-ACED-4E8E4AB7529AQ39399632-8C7DE69A-F051-4A8B-AA99-FB26C522EB24Q40155463-33476B90-B076-460F-AC66-74892DADEA12Q41771067-6E45101E-5A7E-405E-B285-20F0087F483CQ41962161-0D9CCF24-D36A-45DC-9893-95D5213F6758Q49340786-18CBD009-E2C6-4155-951F-199A658D0B13Q52659449-D9F4C294-FDEF-473E-A190-2E7E0ED58135Q55253163-EE8335A5-B488-4364-9324-E058F4F4D3C9Q57144289-35A0FE95-D32D-4322-A5B6-4B34FAA57E9BQ57464694-77D82C28-F041-4996-AF42-0BB1F9277E06
P2860
Major groove width variations in RNA structures determined by NMR and impact of 13C residual chemical shift anisotropy and 1H–13C residual dipolar coupling on refinement
description
2010 nî lūn-bûn
@nan
2010 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
Major groove width variations ...... dipolar coupling on refinement
@ast
Major groove width variations ...... dipolar coupling on refinement
@en
Major groove width variations ...... dipolar coupling on refinement
@nl
type
label
Major groove width variations ...... dipolar coupling on refinement
@ast
Major groove width variations ...... dipolar coupling on refinement
@en
Major groove width variations ...... dipolar coupling on refinement
@nl
prefLabel
Major groove width variations ...... dipolar coupling on refinement
@ast
Major groove width variations ...... dipolar coupling on refinement
@en
Major groove width variations ...... dipolar coupling on refinement
@nl
P2093
P2860
P1476
Major groove width variations ...... dipolar coupling on refinement
@en
P2093
Benyam Kinde
Blanton S Tolbert
David A Case
Michael F Summers
Patrice Starck
Rashmi Singh
Shawn Barton
Yasuyuki Miyazaki
P2860
P2888
P304
P356
10.1007/S10858-010-9424-X
P577
2010-07-01T00:00:00Z
P5875
P6179
1000207805