The role of water in sequence-independent ligand binding by an oligopeptide transporter protein
about
Computational analysis of phosphopeptide binding to the polo-box domain of the mitotic kinase PLK1 using molecular dynamics simulationDirect-coupling analysis of residue coevolution captures native contacts across many protein familiesRational approaches to improving selectivity in drug designRelating structure to thermodynamics: The crystal structures and binding affinity of eight OppA-peptide complexesA new functional domain of guanine nucleotide dissociation inhibitor (alpha-GDI) involved in Rab recyclingThe role of hydrogen bonding via interfacial water molecules in antigen-antibody complexation. The HyHEL-10-HEL interactionCrystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coliThe structural basis for peptide selection by the transport receptor OppAStructural Analysis of Semi-specific Oligosaccharide Recognition by a Cellulose-binding Protein of Thermotoga maritima Reveals Adaptations for Functional Diversification of the Oligopeptide Periplasmic Binding Protein FoldCrystal structure of a prokaryotic homologue of the mammalian oligopeptide-proton symporters, PepT1 and PepT2Methyl, ethyl, propyl, butyl: futile but not for water, as the correlation of structure and thermodynamic signature shows in a congeneric series of thermolysin inhibitorsThe X-ray structure of the PurR-guanine-purF operator complex reveals the contributions of complementary electrostatic surfaces and a water-mediated hydrogen bond to corepressor specificity and binding affinityOn the binding mechanism of the peptide receptor of the oligopeptide transport system of Lactococcus lactisInfluence of Glu-376 --> Gln mutation on enthalpy and heat capacity changes for the binding of slightly altered ligands to medium chain acyl-CoA dehydrogenaseA Pyranose-2-Phosphate Motif Is Responsible for Both Antibiotic Import and Quorum-Sensing Regulation in Agrobacterium tumefaciensFree-energy calculations of residue mutations in a tripeptide using various methods to overcome inefficient samplingHydration effects on the efficacy of the Epidermal growth factor receptor kinase inhibitor afatinib.Interfacial water molecules in SH3 interactions: Getting the full picture on polyproline recognition by protein-protein interaction domains.Modeling the hydration layer around proteins: HyPred.Structural insights into the multispecific recognition of dipeptides of deep-sea gram-negative bacterium Pseudoalteromonas sp. strain SM9913.Systematic placement of structural water molecules for improved scoring of protein-ligand interactionsWaterdock 2.0: Water placement prediction for Holo-structures with a pymol pluginEvaluation of the relative stability of liganded versus ligand-free protein conformations using Simplicial Neighborhood Analysis of Protein Packing (SNAPP) method.A medicinal chemist's guide to molecular interactionsRevisiting ligand-induced conformational changes in proteins: essence, advancements, implications and future challenges.Computational analysis of BACE1-ligand complex crystal structures and linear discriminant analysis for identification of BACE1 inhibitors with anti P-glycoprotein binding property.Specificity mutants of the binding protein of the oligopeptide transport system of Lactococcus lactis.Calculation of Relative Binding Free Energy in the Water-Filled Active Site of Oligopeptide-Binding Protein A.Structural and energetic hot-spots for the interaction between a ladder-like polycyclic ether and the anti-ciguatoxin antibody 10C9Fab.Multispecific Substrate Recognition in a Proton-Dependent Oligopeptide Transporter.Target specific proteochemometric model development for BACE1 - protein flexibility and structural water are critical in virtual screening.Insight of endo-1,4-xylanase II from Trichoderma reesei: conserved water-mediated H-bond and ion pairs interactions.Large-scale analysis of water stability in bromodomain binding pockets with grand canonical Monte CarloAdhesive water networks facilitate binding of protein interfacesIntriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes
P2860
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P2860
The role of water in sequence-independent ligand binding by an oligopeptide transporter protein
description
1996 nî lūn-bûn
@nan
1996 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
1996 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
1996年の論文
@ja
1996年学术文章
@wuu
1996年学术文章
@zh-cn
1996年学术文章
@zh-hans
1996年学术文章
@zh-my
1996年学术文章
@zh-sg
1996年學術文章
@yue
name
The role of water in sequence- ...... igopeptide transporter protein
@ast
The role of water in sequence- ...... igopeptide transporter protein
@en
The role of water in sequence- ...... igopeptide transporter protein
@nl
type
label
The role of water in sequence- ...... igopeptide transporter protein
@ast
The role of water in sequence- ...... igopeptide transporter protein
@en
The role of water in sequence- ...... igopeptide transporter protein
@nl
prefLabel
The role of water in sequence- ...... igopeptide transporter protein
@ast
The role of water in sequence- ...... igopeptide transporter protein
@en
The role of water in sequence- ...... igopeptide transporter protein
@nl
P2860
P356
P1476
The role of water in sequence- ...... igopeptide transporter protein
@en
P2093
P2860
P304
P356
10.1038/NSB1296-998
P577
1996-12-01T00:00:00Z