Text mining for metabolic pathways, signaling cascades, and protein networks
about
Defrosting the digital library: bibliographic tools for the next generation web.The BioPAX community standard for pathway data sharingIntegrated bio-entity network: a system for biological knowledge discoveryIntegrative computational biology for cancer researchNetwork integration and graph analysis in mammalian molecular systems biologyiHOP web servicesiHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP websiteChiTaRS 2.1--an improved database of the chimeric transcripts and RNA-seq data with novel sense-antisense chimeric RNA transcriptsBBP: Brucella genome annotation with literature mining and curation.Parameter estimate of signal transduction pathways.In silico pathway reconstruction: Iron-sulfur cluster biogenesis in Saccharomyces cerevisiae.BioPP: a tool for web-publication of biological networksGenomic variation in myeloma: design, content, and initial application of the Bank On A Cure SNP Panel to detect associations with progression-free survivalThe use of Gene Ontology terms for predicting highly-connected 'hub' nodes in protein-protein interaction networks.Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full textA comprehensive benchmark of kernel methods to extract protein-protein interactions from literatureFeatures analysis for identification of date and party hubs in protein interaction network of Saccharomyces Cerevisiae.ChiPPI: a novel method for mapping chimeric protein-protein interactions uncovers selection principles of protein fusion events in cancer.Connecting the dots between PubMed abstractsUncovering the molecular machinery of the human spindle--an integration of wet and dry systems biology.A text-mining system for extracting metabolic reactions from full-text articles.Reverse differentiation as a gene filtering tool in genome expression profiling of adipogenesis for fat marker gene selection and their analysis.METSP: a maximum-entropy classifier based text mining tool for transporter-substrate identification with semistructured textCIDeR: multifactorial interaction networks in human diseases.Novel metrics for evaluating the functional coherence of protein groups via protein semantic network.Which species is it? Species-driven gene name disambiguation using random walks over a mixture of adjacency matrices.Biological network extraction from scientific literature: state of the art and challenges.Using uncertainty to link and rank evidence from biomedical literature for model curation.PathNER: a tool for systematic identification of biological pathway mentions in the literature.A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstracts.Using the iHOP information resource to mine the biomedical literature on genes, proteins, and chemical compounds.
P2860
Q21092568-B343A542-4FB8-42C5-9CEB-CE462CA758CCQ27987775-BA109FA0-ABF3-4446-B207-CD77FC895F84Q28478766-405CA5DE-96C3-4480-B0E0-376446A852F2Q28744621-E0724733-652A-4DB6-8BE5-5ED86034A883Q28751567-54966212-0E30-44C1-8FEE-B38DEA95FCAEQ28757280-1CEA17DF-DBEE-4073-BE54-4862F061DD95Q28763920-B140CE7F-12D8-4C19-8B76-4971D2CEE8B7Q30870920-FAD3A050-6032-4B7E-B9C6-40EA9B407B08Q33250270-D185DCD1-8F4D-49F5-9CDB-9497A18EB8FDQ33264220-02BC8615-6278-4CAD-A419-9E0E762508FCQ33281129-8D98CC45-9657-43A7-962C-EC2CC96D889CQ33285434-5A8DB056-CF44-4F51-89E4-BF3DD38095CAQ33367792-71A17174-B856-477A-B3FA-8966EC491BC3Q33369980-4D0DA715-F120-4845-94BF-4A000EE4225EQ33407992-7E7195E6-9942-49B1-BF81-E2D8F9A7B857Q33628849-10032A85-2C86-4066-9B50-021C474F15D1Q33774716-82BE6152-22BD-47CF-98A4-85260FA33296Q33878062-1A15A736-4235-43AE-9770-D2EE7498B950Q34123707-FC4D3C0F-8BEF-420F-B5C8-AA07C4471617Q34199659-F31CF2F8-469D-42D4-A54F-B668FD3163F3Q34347934-3EA8A9CE-ED5F-40D3-9CF7-27F07E3234CBQ34903773-1F9A2F5C-8C7F-4D9A-BAA0-6970B430411BQ36162744-CCCA50C8-9C34-4630-8858-51B7C8A4FDC6Q36378009-40B6D571-4AE1-4E4E-AC40-DAC8686A1E48Q36570652-25637427-1654-4C73-AA8D-145B5E31B324Q38480180-60231E10-70CA-4AE1-A78E-3B1230AD2593Q39462746-9958CD25-76B0-4BAA-8B50-EE4AF9DA4F0CQ42696043-7586C932-48FF-429D-AA2A-2BF42763AEE3Q42844532-AFF0CCE2-1BE0-4B2A-AB5B-A32CD6701034Q49980750-49198BD8-BD42-41D4-B76D-8E42BF77DEB7Q51888045-CCD55333-785B-4DCA-9590-540A03E5F09B
P2860
Text mining for metabolic pathways, signaling cascades, and protein networks
description
2005 nî lūn-bûn
@nan
2005 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年学术文章
@wuu
2005年学术文章
@zh-cn
2005年学术文章
@zh-hans
2005年学术文章
@zh-my
2005年学术文章
@zh-sg
2005年學術文章
@yue
name
Text mining for metabolic pathways, signaling cascades, and protein networks
@ast
Text mining for metabolic pathways, signaling cascades, and protein networks
@en
Text mining for metabolic pathways, signaling cascades, and protein networks
@nl
type
label
Text mining for metabolic pathways, signaling cascades, and protein networks
@ast
Text mining for metabolic pathways, signaling cascades, and protein networks
@en
Text mining for metabolic pathways, signaling cascades, and protein networks
@nl
prefLabel
Text mining for metabolic pathways, signaling cascades, and protein networks
@ast
Text mining for metabolic pathways, signaling cascades, and protein networks
@en
Text mining for metabolic pathways, signaling cascades, and protein networks
@nl
P2093
P2860
P356
P1476
Text mining for metabolic pathways, signaling cascades, and protein networks
@en
P2093
Alfonso Valencia
Eduardo Andres
Javier Tamames
Robert Hoffmann
P2860
P356
10.1126/STKE.2832005PE21
P407
P577
2005-05-10T00:00:00Z