Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping - Wikidata - wikimedia - TriplyDB

Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

http://www.wikidata.org/entity/Q28269954

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Structural basis of UGUA recognition by the Nudix protein CFI(m)25 and implications for a regulatory role in mRNA 3' processing HITS-CLIP: panoramic views of protein-RNA regulation in living cells Neuronal Elav-like (Hu) proteins regulate RNA splicing and abundance to control glutamate levels and neuronal excitability.starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data Muscleblind-like 2-mediated alternative splicing in the developing brain and dysregulation in myotonic dystrophy Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo RNA Binding Proteins in the miRNA Pathway Splicing Regulation of Pro-Inflammatory Cytokines and Chemokines: At the Interface of the Neuroendocrine and Immune Systems RNA protein interaction in neurons Misregulation of pre-mRNA alternative splicing in cancer Identification of RNA-protein interaction networks using PAR-CLIP Splicing factors control C. elegans behavioural learning in a single neuron by producing DAF-2c receptor An EMT-driven alternative splicing program occurs in human breast cancer and modulates cellular phenotype Crystallographic Analysis of Polypyrimidine Tract-Binding Protein-Raver1 Interactions Involved in Regulation of Alternative Splicing Structure, dynamics and RNA binding of the multi-domain splicing factor TIA-1 Solution and crystal structures of a C-terminal fragment of the neuronal isoform of the polypyrimidine tract binding protein (nPTB)The role of splicing factors in deregulation of alternative splicing during oncogenesis and tumor progression Context-dependent control of alternative splicing by RNA-binding proteins Alternative pre-mRNA splicing regulation in cancer: pathways and programs unhinged Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis The splicing regulator PTBP2 interacts with the cytidine deaminase AID and promotes binding of AID to switch-region DNA Deletion of AU-rich elements within the Bcl2 3'UTR reduces protein expression and B cell survival in vivo Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2β in development Fox-3 and PSF interact to activate neural cell-specific alternative splicing Analysis of Protein-RNA Interactions with Single-Nucleotide Resolution Using iCLIP and Next-Generation Sequencing A deep learning framework for modeling structural features of RNA-binding protein targets.Both Maintenance and Avoidance of RNA-Binding Protein Interactions Constrain Coding Sequence Evolution.Site identification in high-throughput RNA-protein interaction data Statistical and Computational Methods for High-Throughput Sequencing Data Analysis of Alternative Splicing.A Quantitative Profiling Tool for Diverse Genomic Data Types Reveals Potential Associations between Chromatin and Pre-mRNA Processing.Assessing Computational Steps for CLIP-Seq Data Analysis.Comparative analysis of mRNA isoform expression in cardiac hypertrophy and development reveals multiple post-transcriptional regulatory modules.De novo prediction of PTBP1 binding and splicing targets reveals unexpected features of its RNA recognition and function.Impact of human pathogenic micro-insertions and micro-deletions on post-transcriptional regulation.The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism.iCLIP predicts the dual splicing effects of TIA-RNA interactions.RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome

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Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

http://www.wikidata.org/entity/Q28269954

description

2009 nî lūn-bûn

@nan

2009 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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type

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

@nl

prefLabel

Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

@en

Genome-wide analysis of PTB-RN ...... ate exon inclusion or skipping

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Douglas L Black

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Gene Yeo

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Hui Sun

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Tongbin Wu

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Tuo Zhu

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Xiang-Dong Fu

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Xiong Ji

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Yi Zhang

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Young-Soo Kwon

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P2860

Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing

Determination of functional domains in polypyrimidine-tract-binding protein

An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

The domains of polypyrimidine tract binding protein have distinct RNA structural preferences

Alternative isoform regulation in human tissue transcriptomes

Mechanisms of alternative pre-messenger RNA splicing

Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition

A neuron-specific splicing switch mediated by an array of pre-mRNA repressor sites: evidence of a regulatory role for the polypyrimidine tract binding protein and a brain-specific PTB counterpart.

The M2 splice isoform of pyruvate kinase is important for cancer metabolism and tumour growth

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