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Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

http://www.wikidata.org/entity/Q28299787

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Defining functional DNA elements in the human genome How to Predict Molecular Interactions between Species?Tyro3 Modulates Mertk-Associated Retinal Degeneration Understanding rare and common diseases in the context of human evolution A survey of best practices for RNA-seq data analysis Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans The genetic and mechanistic basis for variation in gene regulation RNA Sequencing and Analysis A gene-based association method for mapping traits using reference transcriptome data Winner's Curse Correction and Variable Thresholding Improve Performance of Polygenic Risk Modeling Based on Genome-Wide Association Study Summary-Level Data Multi-ethnic analysis reveals soluble L-selectin may be post-transcriptionally regulated by 3'UTR polymorphism: the Multi-Ethnic Study of Atherosclerosis (MESA).Pharmacogenomics of Drug Response in Type 2 Diabetes: Toward the Definition of Tailored Therapies?Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels Recommendations for Accurate Resolution of Gene and Isoform Allele-Specific Expression in RNA-Seq Data.A Flexible, Efficient Binomial Mixed Model for Identifying Differential DNA Methylation in Bisulfite Sequencing Data.Identification of candidate genes for prostate cancer-risk SNPs utilizing a normal prostate tissue eQTL data set Cis-eQTL-based trans-ethnic meta-analysis reveals novel genes associated with breast cancer risk.Gene co-expression network connectivity is an important determinant of selective constraint.Mapping eQTLs with RNA-seq reveals novel susceptibility genes, non-coding RNAs and alternative-splicing events in systemic lupus erythematosus Prediction of gene expression with cis-SNPs using mixed models and regularization methods An independent component analysis confounding factor correction framework for identifying broad impact expression quantitative trait loci Progress in genomics according to bingo: 2013 edition.Hypermethylation in the ZBTB20 gene is associated with major depressive disorder.Genetic-epigenetic interactions in cis: a major focus in the post-GWAS era Effects of Type 1 Diabetes Risk Alleles on Immune Cell Gene Expression Effects of long-term averaging of quantitative blood pressure traits on the detection of genetic associations Non-Coding Loss-of-Function Variation in Human Genomes.Differential expression analysis for RNAseq using Poisson mixed models.Integrative genomics reveals novel molecular pathways and gene networks for coronary artery disease.Heritability and genetic basis of protein level variation in an outbred population.Massively parallel quantification of the regulatory effects of noncoding genetic variation in a human cohort.Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations Identification of genetic variants associated with alternative splicing using sQTLseekeR.Transcriptome sequencing of a large human family identifies the impact of rare noncoding variants RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations.Variation and genetic control of gene expression in primary immunocytes across inbred mouse strains.Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans.Schizophrenia interactome with 504 novel protein-protein interactions DRIMSeq: a Dirichlet-multinomial framework for multivariate count outcomes in genomics.Approaches for establishing the function of regulatory genetic variants involved in disease.

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Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

http://www.wikidata.org/entity/Q28299787

description

2014 nî lūn-bûn

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2014 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի հունվարին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Characterizing the genetic bas ...... -sequencing of 922 individuals

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Genome Research

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Alexis Battle

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Christian D Haudenschild

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Douglas F Levinson

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Jianxin Shi

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Rui Mei

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Stephen B Montgomery

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P2860

Learning a prior on regulatory potential from eQTL data

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

Mapping and quantifying mammalian transcriptomes by RNA-Seq

An integrated encyclopedia of DNA elements in the human genome

Effect of variation in CHI3L1 on serum YKL-40 level, risk of asthma, and lung function

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

TopHat: discovering splice junctions with RNA-Seq

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10.1101/GR.155192.113

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Myrna M. Weissman

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