Understanding the sequence-dependence of DNA groove dimensions: implications for DNA interactions
about
The intrinsic mechanics of B-DNA in solution characterized by NMRA statistical thermodynamic model for investigating the stability of DNA sequences from oligonucleotides to genomes.Importance of the Sequence-Directed DNA Shape for Specific Binding Site Recognition by the Estrogen-Related Receptor.The C-terminal domain of the DNA polymerase catalytic subunit regulates the primase and polymerase activities of the human DNA polymerase α-primase complexAutomatic workflow for the classification of local DNA conformations.Dihedral-based segment identification and classification of biopolymers II: polynucleotidesFlanking A·T basepairs destabilize the B(∗) conformation of DNA A-tracts.Simulations Meet Experiment to Reveal New Insights into DNA Intrinsic Mechanics.Mg2+ in the major groove modulates B-DNA structure and dynamicsStructure and decoy-mediated inhibition of the SOX18/Prox1-DNA interactionPotential Role of the Last Half Repeat in TAL Effectors Revealed by a Molecular Simulation Study.Metal complex interactions with DNA.Dynamic hydrogen bonding and DNA flexibility in minor groove binders: molecular dynamics simulation of the polyamide f-ImPyIm bound to the Mlu1 (MCB) sequence 5'-ACGCGT-3' in 2:1 motif.Minor groove recognition is important for the transcription factor PhoB: a surface plasmon resonance study.DNA supercoiling is a fundamental regulatory principle in the control of bacterial gene expression.Another step toward DNA selective targeting: Ni(II) and Cu(II) complexes of a Schiff base ligand able to bind gene promoter G-quadruplexes.Optimization of the CHARMM additive force field for DNA: Improved treatment of the BI/BII conformational equilibrium.All-atom polarizable force field for DNA based on the classical Drude oscillator modelDifferential Deformability of the DNA Minor Groove and Altered BI/BII Backbone Conformational Equilibrium by the Monovalent Ions Li(+), Na(+), K(+), and Rb(+) via Water-Mediated Hydrogen Bonding.Sequence-specific transitions of the torsion angle gamma change the polar-hydrophobic profile of the DNA grooves: implication for indirect protein-DNA recognition.Sensitivity of [Ru(phen)2dppz]2+ light switch emission to ionic strength, temperature, and DNA sequence and conformation.Conformational rearrangement of 1,2-d(GG) intrastrand cis-diammineplatinum crosslinked DNA is driven by counter-ion penetration within the minor groove of the modified site.DNA minor groove electrostatic potential: influence of sequence-specific transitions of the torsion angle gamma and deoxyribose conformations.
P2860
Q28834499-991383A6-A7AD-4B8D-9770-6AF1EDE83F74Q33736568-23074B1E-F7CF-4702-B7AA-90E376DF64D5Q33813823-CCDAEC34-B865-4A65-86CE-4BBB681030E2Q34070370-C9BCFEF2-2736-485E-A241-BF46B68E52E0Q34783372-7C3E66EF-36D8-4CDA-ADA4-EBFFD842E64EQ35074442-8BBA4381-E4BC-4370-B14F-1E986CED36E0Q35578917-2CF8487B-AB08-4887-A570-AAAB52DEEB27Q35866373-F35B166D-89E6-4B8D-8195-12583AD59C12Q36109636-6D0188C6-C8C8-43E2-9B36-264920A27991Q36870509-4A9150A0-DEFE-4BFD-90A5-A931F01478EAQ37359797-904D232E-D53F-47D7-A45E-28DF23D6F928Q38271731-A269A268-4CD5-47B1-BE37-C7791E5E5DD1Q38300869-FE9A1461-6175-4BC5-9FCC-F649B1C5B8E2Q38331923-BBDA26D2-EE35-4833-9823-0E1B061980D6Q39310921-E89D4AB8-0A08-4BF0-BE18-296E1C79C54BQ41292788-918E28E2-AD7C-41F2-823B-24CEC88EA96AQ41476736-F3F59DFE-58E3-45E1-BB6D-59AEF823CAFEQ41512422-0255A6C2-008B-43DD-A386-A5E3C65AC0BDQ43161754-7F95A3D3-A813-4022-A41B-DCC21A30657AQ43688809-E1BDD622-6F99-4BFA-B63F-061D4438CE38Q44377809-C80839B9-A56A-4CC8-8F0D-4D1DD14FA4A9Q47885523-A0C13F8C-3532-4F65-9DAF-058C8977057DQ51351697-A8EF0D2F-9859-4423-BE14-35FABCFE8527
P2860
Understanding the sequence-dependence of DNA groove dimensions: implications for DNA interactions
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2010 nî lūn-bûn
@nan
2010 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2010年の論文
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2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
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name
Understanding the sequence-dep ...... lications for DNA interactions
@ast
Understanding the sequence-dep ...... lications for DNA interactions
@en
Understanding the sequence-dep ...... lications for DNA interactions
@nl
type
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Understanding the sequence-dep ...... lications for DNA interactions
@ast
Understanding the sequence-dep ...... lications for DNA interactions
@en
Understanding the sequence-dep ...... lications for DNA interactions
@nl
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Understanding the sequence-dep ...... lications for DNA interactions
@ast
Understanding the sequence-dep ...... lications for DNA interactions
@en
Understanding the sequence-dep ...... lications for DNA interactions
@nl
P2860
P3181
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P1476
Understanding the sequence-dep ...... lications for DNA interactions
@en
P2093
Brigitte Hartmann
Christophe Oguey
P2860
P304
P3181
P356
10.1371/JOURNAL.PONE.0015931
P407
P577
2010-12-29T00:00:00Z