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Community flux balance analysis for microbial consortia at balanced growth

Community flux balance analysis for microbial consortia at balanced growth

http://www.wikidata.org/entity/Q28533513

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Metabolic Network Modeling of Microbial Interactions in Natural and Engineered Environmental Systems Synthetic Ecology of Microbes: Mathematical Models and Applications From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems Towards predictive models of the human gut microbiome A framework for application of metabolic modeling in yeast to predict the effects of nsSNV in human orthologs Multiscale Metabolic Modeling of C4 Plants: Connecting Nonlinear Genome-Scale Models to Leaf-Scale Metabolism in Developing Maize Leaves Metabolic network modeling of microbial communities.Context-specific metabolic network reconstruction of a naphthalene-degrading bacterial community guided by metaproteomic data.Degradation Network Reconstruction Guided by Metagenomic Data.From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the "terroir" Concept.SteadyCom: Predicting microbial abundances while ensuring community stability Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics Synthetic microbial communities.Emergent biosynthetic capacity in simple microbial communities.(Post-)genomics approaches in fungal research.Symbiosis, dysbiosis, and rebiosis-the value of metaproteomics in human microbiome monitoring.Systems biology of host-microbe metabolomics.Thermodynamics and H2 Transfer in a Methanogenic, Syntrophic Community An Economic Framework of Microbial Trade.A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems.Model-based quantification of metabolic interactions from dynamic microbial-community data.A novel consortium of Lactobacillus rhamnosus and Streptococcus thermophilus for increased access to functional fermented foods.Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism.Genomic Analysis of the Human Gut Microbiome Suggests Novel Enzymes Involved in Quinone Biosynthesis.Multiscale Model of Mycobacterium tuberculosis Infection Maps Metabolite and Gene Perturbations to Granuloma Sterilization Predictions Metabolic modelling in a dynamic evolutionary framework predicts adaptive diversification of bacteria in a long-term evolution experiment.MMinte: an application for predicting metabolic interactions among the microbial species in a community.Genome-Scale Metabolic Modeling of Archaea Lends Insight into Diversity of Metabolic Function.Toward quantitative understanding on microbial community structure and functioning: a modeling-centered approach using degradation of marine oil spills as example.Parametric studies of metabolic cooperativity in Escherichia coli colonies: Strain and geometric confinement effects.Seeing the wood for the trees: a forest of methods for optimization and omic-network integration in metabolic modelling.A Diverse Community To Study Communities: Integration of Experiments and Mathematical Models To Study Microbial Consortia.Constraint-based stoichiometric modelling from single organisms to microbial communities.Perilipin-2 modulates dietary fat-induced microbial global gene expression profiles in the mouse intestine.Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process.Systems modeling approaches for microbial community studies: from metagenomics to inference of the community structure.From Genes to Ecosystems in Microbiology: Modeling Approaches and the Importance of Individuality.Metabolic Model Reconstruction and Analysis of an Artificial Microbial Ecosystem.Resources and tools for the high-throughput, multi-omic study of intestinal microbiota.A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites.

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Community flux balance analysis for microbial consortia at balanced growth

http://www.wikidata.org/entity/Q28533513

description

2013 nî lūn-bûn

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2013 թուականին հրատարակուած գիտական յօդուած

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2013 թվականին հրատարակված գիտական հոդված

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2013年の論文

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Community flux balance analysis for microbial consortia at balanced growth

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Brett G Olivier

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Frank J Bruggeman

http://www.w3.org/2001/XMLSchema#string

Ruchir A Khandelwal

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Wilfred F M Röling

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P2860

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Environments that induce synthetic microbial ecosystems

Bacterial community structures are unique and resilient in full-scale bioenergy systems

Microbial ecology: human gut microbes associated with obesity

Reconstructing the metabolic network of a bacterium from its genome

Applications of genome-scale metabolic reconstructions.

Genome-scale models of microbial cells: evaluating the consequences of constraints

Emergent biogeography of microbial communities in a model ocean.

Evolution of Escherichia coli during growth in a constant environment

Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli

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