Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps - Wikidata - wikimedia - TriplyDB

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps

http://www.wikidata.org/entity/Q28597795

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Comparative genomics of Eucalyptus and Corymbia reveals low rates of genome structural rearrangement A Targeted Capture Linkage Map Anchors the Genome of the Schistosomiasis Vector Snail, Biomphalaria glabrata.A ddRAD Based Linkage Map of the Cultivated Strawberry, Fragaria xananassa.Global identification and analysis of long non-coding RNAs in diploid strawberry Fragaria vesca during flower and fruit development Diversity Arrays Technology (DArT) Marker Platforms for Diversity Analysis and Linkage Mapping in a Complex Crop, the Octoploid Cultivated Strawberry (Fragaria × ananassa).Reference transcriptomes and detection of duplicated copies in hexaploid and allododecaploid Spartina species (Poaceae).High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers Comparative Transcriptomics of Strawberries (Fragaria spp.) Provides Insights into Evolutionary Patterns.Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragaria × ananassa)Multilocus Sex Determination Revealed in Two Populations of Gynodioecious Wild Strawberry, Fragaria vesca subsp. bracteata.Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima.Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms.Genome-scale DNA variant analysis and functional validation of a SNP underlying yellow fruit color in wild strawberry.Homomorphic ZW chromosomes in a wild strawberry show distinctive recombination heterogeneity but a small sex-determining region Narrowing down the single homoeologous FaPFRU locus controlling flowering in cultivated octoploid strawberry using a selective mapping strategy.Altered regulation of TERMINAL FLOWER 1 causes the unique vernalisation response in an arctic woodland strawberry accession.Evaluating allopolyploid origins in strawberries (Fragaria) using haplotypes generated from target capture sequencing An eFP browser for visualizing strawberry fruit and flower transcriptomes.Global identification of alternative splicing via comparative analysis of SMRT- and Illumina-based RNA-seq in strawberry.RNAi-mediated endogene silencing in strawberry fruit: detection of primary and secondary siRNAs by deep sequencing.Identification of a methyltransferase catalyzing the final step of methyl anthranilate synthesis in cultivated strawberry Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families.Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle.Additive QTLs on three chromosomes control flowering time in woodland strawberry (Fragaria vesca L.).Early metabolic and transcriptional variations in fruit of natural white-fruited Fragaria vesca genotypes.Present-day sympatry belies the evolutionary origin of a high-order polyploid.Genome re-annotation of the wild strawberry Fragaria vesca using extensive Illumina- and SMRT-based RNA-seq datasets.Sequence analysis of cultivated strawberry (Fragaria × ananassa Duch.) using microdissected single somatic chromosomes.Genetic Mapping and Phylogenetic Analysis Reveal Intraspecific Variation in Sex Chromosomes of the Virginian Strawberry.Gene expression atlas of fruit ripening and transcriptome assembly from RNA-seq data in octoploid strawberry (Fragaria × ananassa).XTHs from Fragaria vesca: genomic structure and transcriptomic analysis in ripening fruit and other tissues.A New Perspective on Polyploid Fragaria (strawberry) Genome Composition Based on Large-Scale, Multi-Locus Phylogenetic Analysis.A Specific Gibberellin 20-Oxidase Dictates the Flowering-Runnering Decision in Diploid Strawberry.Insight into octoploid strawberry (Fragaria) subgenome composition revealed by GISH analysis of pentaploid hybrids.Validation of a PCR test to predict the presence of flavor volatiles mesifurane and γ-decalactone in fruits of cultivated strawberry (Fragaria × ananassa).Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes.FaRXf1: a locus conferring resistance to angular leaf spot caused by Xanthomonas fragariae in octoploid strawberry.The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding.The genome of black raspberry (Rubus occidentalis).In silico analysis of 3 expansin gene promoters reveals 2 hubs controlling light and cytokinins response during bud outgrowth.

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P2860

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps

http://www.wikidata.org/entity/Q28597795

description

2014 nî lūn-bûn

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2014 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Genome Biology and Evolution

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Evolutionary origins and dynam ...... targeted capture linkage maps

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Aaron Liston

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Jacob A Tennessen

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Rajanikanth Govindarajulu

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P2860

Polyploid Incidence and Evolution

A Draft Sequence of the Neandertal Genome

The frequency of polyploid speciation in vascular plants

The genome of woodland strawberry (Fragaria vesca)

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

Fast and accurate short read alignment with Burrows-Wheeler transform

BLAT--the BLAST-like alignment tool

Mechanisms of genomic rearrangements and gene expression changes in plant polyploids

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

The Sequence Alignment/Map format and SAMtools

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scholarly article

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249218

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10.1093/GBE/EVU261

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12

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6

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Tia-Lynn Ashman

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