Open science resources for the discovery and analysis of Tara Oceans data - Wikidata - wikimedia - TriplyDB

Open science resources for the discovery and analysis of Tara Oceans data

Open science resources for the discovery and analysis of Tara Oceans data

http://www.wikidata.org/entity/Q28647056

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Toward Accurate and Quantitative Comparative Metagenomics Towards quantitative viromics for both double-stranded and single-stranded DNA viruses Survey of the green picoalga Bathycoccus genomes in the global ocean Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages The Tara Oceans voyage reveals global diversity and distribution patterns of marine planktonic ciliates The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation.Microbial Dysbiosis: Rethinking Disease in Marine Ecosystems Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton Insights into global diatom distribution and diversity in the world's ocean Illuminating structural proteins in viral "dark matter" with metaproteomics Plankton networks driving carbon export in the oligotrophic ocean The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.).Novel Abundant Oceanic Viruses of Uncultured Marine Group II Euryarchaeota.Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding.Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans.In situ imaging reveals the biomass of giant protists in the global ocean.Diel Rhythm Does Not Shape the Vertical Distribution of Bacterial and Archaeal 16S rRNA Transcript Diversity in Intertidal Sediments: a Mesocosm Study.Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona.Biogeography and diversity of Collodaria (Radiolaria) in the global ocean.The evolution of diatoms and their biogeochemical functions.Global genetic capacity for mixotrophy in marine picocyanobacteria.Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets.Phylogenetic conservation of freshwater lake habitat preference varies between abundant bacterioplankton phyla.DNA metabarcoding reveals that 200 μm size-fractionated filtering is unable to discriminate between planktonic microbial and large eukaryotes.Evaluation of single-cell genomics to address evolutionary questions using three SAGs of the choanoflagellate Monosiga brevicollis.Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing.Quantitative 3D-imaging for cell biology and ecology of environmental microbial eukaryotes.Strain recovery from metagenomes.A compendium of geochemical information from the Saanich Inlet water column.A global ocean atlas of eukaryotic genes.Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans.The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans.The epibiotic life of the cosmopolitan diatom Fragilariopsis doliolus on heterotrophic ciliates in the open ocean.Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters.Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages.Purine catabolic pathway revealed by transcriptomics in the model marine bacterium Ruegeria pomeroyi DSS-3.Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export.An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region.

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Open science resources for the discovery and analysis of Tara Oceans data

http://www.wikidata.org/entity/Q28647056

description

2015 nî lūn-bûn

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2015 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2015 թվականի մայիսին հրատարակված գիտական հոդված

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年论文

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name

Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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type

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Open science resources for the discovery and analysis of Tara Oceans data

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Scientific Data

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Eric Karsenti

http://www.w3.org/2001/XMLSchema#string

Fabrice Not

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Gabriel Gorsky

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Marc Picheral

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Noan Le Bescot

http://www.w3.org/2001/XMLSchema#string

Romain Troublé

http://www.w3.org/2001/XMLSchema#string

Sarah Searson

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Stefanie Kandels-Lewis

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Tara Oceans Consortium Coordinators

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P2860

The marine viromes of four oceanic regions

Taxonomic distribution of large DNA viruses in the sea

Ecological genomics of marine picocyanobacteria

Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards

Global latitudinal variations in marine copepod diversity and environmental factors

The deep roots of eukaryotes

Marine viruses--major players in the global ecosystem

Abundance and distribution of Ostreococcus sp. in the San Pedro Channel, California, as revealed by quantitative PCR.

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness.

Emergent biogeography of microbial communities in a model ocean.

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150023

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scholarly article

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637258

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10.1038/SDATA.2015.23

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2

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Stéphane Pesant

Stefanie Kandels-Lewis

Stéphane Pesant

Daniele Iudicone

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2015-05-26T00:00:00Z

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277305073

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4443879

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