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Ancient papillomavirus-host co-speciation in Felidae

Ancient papillomavirus-host co-speciation in Felidae

http://www.wikidata.org/entity/Q28757525

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The prehistory of potyviruses: their initial radiation was during the dawn of agriculture Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67 Novel snake papillomavirus does not cluster with other non-mammalian papillomaviruses Paleozoic origin of insect large dsDNA viruses Human papillomavirus genome variants The Ancient Evolutionary History of Polyomaviruses From molecular genetics to phylodynamics: evolutionary relevance of mutation rates across viruses The Global Phylogeography of Lyssaviruses - Challenging the 'Out of Africa' Hypothesis Complete Genome Sequence of the Crocuta crocuta Papillomavirus Type 1 (CcrPV1) from a Spotted Hyena, the First Papillomavirus Characterized in a Member of the Hyaenidae Pathological manifestations of feline immunodeficiency virus (FIV) infection in wild African lions.The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis.Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses The first complete papillomavirus genome characterized from a marsupial host: a novel isolate from Bettongia penicillata Analysis of host-parasite incongruence in papillomavirus evolution using importance sampling.Sequence imputation of HPV16 genomes for genetic association studies.Development of a PCR assay to detect papillomavirus infection in the snow leopard.Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments Disrupted human-pathogen co-evolution: a model for disease.Quantifying the phylodynamic forces driving papillomavirus evolution.Isolation of three novel rat and mouse papillomaviruses and their genomic characterization Analysis of the long control region of bovine papillomavirus type 1 associated with sarcoids in equine hosts indicates multiple cross-species transmission events and phylogeographical structure.Papillomaviruses use recombination-dependent replication to vegetatively amplify their genomes in differentiated cells Evolution and taxonomic classification of alphapapillomavirus 7 complete genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70.Insights into Polyomaviridae microRNA function derived from study of the bandicoot papillomatosis carcinomatosis viruses.Papillomaviruses: Viral evolution, cancer and evolutionary medicine Using more than the oldest fossils: dating osmundaceae with three Bayesian clock approaches.Human papillomavirus genomics: past, present and future A Century of Shope Papillomavirus in Museum Rabbit Specimens.Naturally Occurring Capsid Protein Variants of Human Papillomavirus Genotype 31 Represent a Single L1 Serotype.Genetic Diversity in the Major Capsid L1 Protein of HPV-16 and HPV-18 in the Netherlands.Depletion of CpG Dinucleotides in Papillomaviruses and Polyomaviruses: A Role for Divergent Evolutionary Pressures.A novel virus detected in papillomas and carcinomas of the endangered western barred bandicoot (Perameles bougainville) exhibits genomic features of both the Papillomaviridae and Polyomaviridae.Naturally Occurring Major and Minor Capsid Protein Variants of Human Papillomavirus 45 (HPV45): Differential Recognition by Cross-Neutralizing Antibodies Generated by HPV Vaccines.Classification and nomenclature system for human Alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages Evolution of human papillomavirus carcinogenicity.Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97.Global Genomic Diversity of Human Papillomavirus 11 Based on 433 Isolates and 78 Complete Genome Sequences.Geno- and seroprevalence of Felis domesticus Papillomavirus type 2 (FdPV2) in dermatologically healthy cats.Role of the host restriction factor APOBEC3 on papillomavirus evolution Molecular archeological evidence in support of the repeated loss of a papillomavirus gene

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P2860

Ancient papillomavirus-host co-speciation in Felidae

http://www.wikidata.org/entity/Q28757525

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Ancient papillomavirus-host co-speciation in Felidae

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Ancient papillomavirus-host co-speciation in Felidae

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Ancient papillomavirus-host co-speciation in Felidae

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Janis Joslin

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Koenraad Van Doorslaer

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Relaxed phylogenetics and dating with confidence

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

Mucosal human papillomaviruses encode four different E5 proteins whose chemistry and phylogeny correlate with malignant or benign growth

MUSCLE: multiple sequence alignment with high accuracy and high throughput

The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations

JC virus evolution and its association with human populations

Basic local alignment search tool

MRBAYES: Bayesian inference of phylogenetic trees

The rapid generation of mutation data matrices from protein sequences

T-Coffee: A novel method for fast and accurate multiple sequence alignment

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