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Genome-wide profiling and analysis of Arabidopsis siRNAs

Genome-wide profiling and analysis of Arabidopsis siRNAs

http://www.wikidata.org/entity/Q28763211

about

Characterization of unique small RNA populations from rice grain The Selaginella genome identifies genetic changes associated with the evolution of vascular plants Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense Small RNA diversity in plants and its impact in development deepBase: a database for deeply annotating and mining deep sequencing data Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells RNA polymerase V transcription guides ARGONAUTE4 to chromatin Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome Small RNAs: essential regulators of gene expression and defenses against environmental stresses in plants Root systems biology: integrative modeling across scales, from gene regulatory networks to the rhizosphere Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes siRNA-mediated DNA methylation and H3K9 dimethylation in plants.Long noncoding RNA transcriptome of plants Small RNA-directed epigenetic natural variation in Arabidopsis thaliana Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1 Biochemical requirements for two Dicer-like activities from wheat germ Primer-dependent and primer-independent initiation of double stranded RNA synthesis by purified Arabidopsis RNA-dependent RNA polymerases RDR2 and RDR6 Combined Activity of DCL2 and DCL3 Is Crucial in the Defense against Potato Spindle Tuber Viroid miRNAs Are Involved in Determining the Improved Vigor of Autotetrapoid Chrysanthemum nankingense Diverse Evolutionary Trajectories for Small RNA Biogenesis Genes in the Oomycete Genus Phytophthora Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs Low relative humidity triggers RNA-directed de novo DNA methylation and suppression of genes controlling stomatal development Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus Small RNAs originated from pseudogenes: cis- or trans-acting?Identification of novel miRNAs and miRNA dependent developmental shifts of gene expression in Arabidopsis thaliana Evolution of Arabidopsis MIR genes generates novel microRNA classes Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes Small RNAs as guardians of the genome Linkage of microRNA and proteome-based profiling data sets: a perspective for the priorization of candidate biomarkers in renal cell carcinoma?SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing.Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function.Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and unexpected changes in the expression of transposons, genes, and 24-nt small RNAs.Transcriptional activity of transposable elements in maize HiCdat: a fast and easy-to-use Hi-C data analysis tool.Deep sequencing of wheat sRNA transcriptome reveals distinct temporal expression pattern of miRNAs in response to heat, light and UV.A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing.

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Genome-wide profiling and analysis of Arabidopsis siRNAs

http://www.wikidata.org/entity/Q28763211

description

2007 nî lūn-bûn

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2007 թուականի Մարտին հրատարակուած գիտական յօդուած

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2007 թվականի մարտին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

@zh-hk

2007年論文

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2007年論文

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2007年论文

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name

Genome-wide profiling and analysis of Arabidopsis siRNAs

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Genome-wide profiling and analysis of Arabidopsis siRNAs

@en

Genome-wide profiling and analysis of Arabidopsis siRNAs

@nl

type

label

Genome-wide profiling and analysis of Arabidopsis siRNAs

@ast

Genome-wide profiling and analysis of Arabidopsis siRNAs

@en

Genome-wide profiling and analysis of Arabidopsis siRNAs

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prefLabel

Genome-wide profiling and analysis of Arabidopsis siRNAs

@ast

Genome-wide profiling and analysis of Arabidopsis siRNAs

@en

Genome-wide profiling and analysis of Arabidopsis siRNAs

@nl

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JOURNAL.PBIO.0050057

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Genome-wide profiling and analysis of Arabidopsis siRNAs

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Christopher M Sullivan

http://www.w3.org/2001/XMLSchema#string

Elisabeth J Chapman

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Jason S Cumbie

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Kristin D Kasschau

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A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis

Genome sequencing in microfabricated high-density picolitre reactors

SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis

Significance analysis of microarrays applied to the ionizing radiation response

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

MicroRNAs in plants

NCBI GEO: mining millions of expression profiles--database and tools

ASRP: the Arabidopsis Small RNA Project Database

Genetic and functional diversification of small RNA pathways in plants

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

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e57

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scholarly article

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1527080

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10.1371/JOURNAL.PBIO.0050057

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3

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James C. Carrington

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2007-03-01T00:00:00Z

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6507561

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17298187

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1820830

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