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Four decades of transmission of a multidrug-resistant Mycobacterium tuberculosis outbreak strain

Four decades of transmission of a multidrug-resistant Mycobacterium tuberculosis outbreak strain

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Inferences from tip-calibrated phylogenies: a review and a practical guide Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal MDR-TB Outbreak among HIV-Negative Tunisian Patients followed during 11 Years Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study The within-host population dynamics of Mycobacterium tuberculosis vary with treatment efficacy.Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance.Mycobacterium tuberculosis Whole Genome Sequences From Southern India Suggest Novel Resistance Mechanisms and the Need for Region-Specific Diagnostics.Isoniazid-resistant tuberculosis: a cause for concern?Pyrazinamide resistance-conferring mutations in pncA and the transmission of multidrug resistant TB in Georgia The Impact of Selection, Gene Conversion, and Biased Sampling on the Assessment of Microbial Demography.Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999-2009.Comprehensive Whole-Genome Sequencing and Reporting of Drug Resistance Profiles on Clinical Cases of Mycobacterium tuberculosis in New York State.Baeyer-Villiger Monooxygenases EthA and MymA Are Required for Activation of Replicating and Non-replicating Mycobacterium tuberculosis Inhibitors Impact of HIV co-infection on the evolution and transmission of multidrug-resistant tuberculosis Detection and characterization of drug-resistant conferring genes in Mycobacterium tuberculosis complex strains: A prospective study in two distant regions of Ghana.Armed conflict and population displacement as drivers of the evolution and dispersal of Mycobacterium tuberculosis.Mycobacterium tuberculosis Multidrug-Resistant Strain M Induces Low IL-8 and Inhibits TNF-α Secretion by Bronchial Epithelial Cells Altering Neutrophil Effector Functions.Genome-scale rates of evolutionary change in bacteria.Emergence and Spread of Antimicrobial Resistance: Recent Insights from Bacterial Population Genomics.Antimicrobial resistance in Mycobacterium tuberculosis: mechanistic and evolutionary perspectives.DNA Replication in Mycobacterium tuberculosis.tipdatingbeast: an r package to assist the implementation of phylogenetic tip-dating tests using beast.Protecting Pyrazinamide, a Priority for Improving Outcomes in Multidrug-Resistant Tuberculosis Treatment.Draft Genome Sequence of the First Confirmed Isolate of Multidrug-Resistant Mycobacterium tuberculosis in Tasmania.Multi-clonal evolution of multi-drug-resistant/extensively drug-resistant Mycobacterium tuberculosis in a high-prevalence setting of Papua New Guinea for over three decades.The Evolution of Strain Typing in the Mycobacterium tuberculosis Complex.Strain Diversity and the Evolution of Antibiotic Resistance.Genomic Epidemiology of Tuberculosis.The Nature and Evolution of Genomic Diversity in the Mycobacterium tuberculosis Complex.Molecular epidemiology of tuberculosis in Tasmania and genomic characterisation of its first known multi-drug resistant case.Isoniazid Monoresistance: A Precursor to Multidrug-Resistant Tuberculosis?Simultaneous drug resistance detection and genotyping of Mycobacterium tuberculosis using a low-density hydrogel microarray.Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats.Fluoromycobacteriophages Can Detect Viable and Determine Phenotypic Rifampicin Resistance in 3-5 Days From Sputum Collection Insights into the processes that drive the evolution of drug resistance in Mycobacterium tuberculosis Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data Epidemiological and genomic determinants of tuberculosis outbreaks in First Nations communities in Canada Global expansion of lineage 4 shaped by colonial migration and local adaptation Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam

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Four decades of transmission of a multidrug-resistant Mycobacterium tuberculosis outbreak strain

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2015 թվականի մայիսին հրատարակված գիտական հոդված

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2015年の論文

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Nature Communications

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Four decades of transmission o ...... m tuberculosis outbreak strain

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Adrien Rieux

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Beatriz Lopez

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Benjamin Sobkowiak

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Johana Monteserin

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

BEAST: Bayesian evolutionary analysis by sampling trees.

Extensively drug-resistant tuberculosis as a cause of death in patients co-infected with tuberculosis and HIV in a rural area of South Africa

NADH dehydrogenase defects confer isoniazid resistance and conditional lethality in Mycobacterium smegmatis

Tuberculosis drug resistance mutation database

New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: functional genetic analysis of gyrA and gyrB mutations

Mycothiol biosynthesis is essential for ethionamide susceptibility in Mycobacterium tuberculosis

Molecular tracing of the emergence, diversification, and transmission of S. aureus sequence type 8 in a New York community

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study

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10.1038/NCOMMS8119

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6

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Francois Balloux

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1043048222

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Mycobacterium tuberculosis

multiple drug resistance

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4432642

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