KoBaMIN: a knowledge-based minimization web server for protein structure refinement. - Wikidata - wikimedia - TriplyDB

KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

http://www.wikidata.org/entity/Q30416490

about

Hemotin, a Regulator of Phagocytosis Encoded by a Small ORF and Conserved across Metazoans Structural diversity in the dandelion (Taraxacum officinale) polyphenol oxidase family results in different responses to model substrates Functional and structural characterization of a novel putative cysteine protease cell wall-modifying multi-domain enzyme selected from a microbial metagenome.Evaluation of predictions in the CASP10 model refinement category.Princeton_TIGRESS: protein geometry refinement using simulations and support vector machines.Biologically inspired intelligent decision making: a commentary on the use of artificial neural networks in bioinformatics Association between PARP-1 V762A polymorphism and breast cancer susceptibility in Saudi population.WeFold: a coopetition for protein structure prediction Protein structure refinement via molecular-dynamics simulations: What works and what does not?Protein structure refinement with adaptively restrained homologous replicas.3Drefine: an interactive web server for efficient protein structure refinement.Computational Analysis of Damaging Single-Nucleotide Polymorphisms and Their Structural and Functional Impact on the Insulin Receptor Princeton_TIGRESS 2.0: High refinement consistency and net gains through support vector machines and molecular dynamics in double-blind predictions during the CASP11 experiment.Study of intra-inter species protein-protein interactions for potential drug targets identification and subsequent drug design for Escherichia coli O104:H4 C277-11.Naturally selecting solutions: the use of genetic algorithms in bioinformatics.Physics-based protein structure refinement through multiple molecular dynamics trajectories and structure averaging.GalaxyRefine: Protein structure refinement driven by side-chain repacking Histone deacetylase inhibition modulates histone acetylation at gene promoter regions and affects genome-wide gene transcription in Schistosoma mansoni Experimental and bioinformatic characterization of a recombinant polygalacturonase-inhibitor protein from pearl millet and its interaction with fungal polygalacturonases.Molecular dissection of Mycobacterium tuberculosis integration host factor reveals novel insights into the mode of DNA binding and nucleoid compaction Two-pore channels provide insight into the evolution of voltage-gated Ca2+ and Na+ channels.A new set of ESTs from chickpea (Cicer arietinum L.) embryo reveals two novel F-box genes, CarF-box_PP2 and CarF-box_LysM, with potential roles in seed development A Computational Approach towards the Understanding of Plasmodium falciparum Multidrug Resistance Protein 1 Amyotrophic Lateral Sclerosis Type 20 - In Silico Analysis and Molecular Dynamics Simulation of hnRNPA1 A Recombinant Fungal Chitin Deacetylase Produces Fully Defined Chitosan Oligomers with Novel Patterns of Acetylation.A conserved NAD+ binding pocket that regulates protein-protein interactions during aging.REH2C Helicase and GRBC Subcomplexes May Base Pair through mRNA and Small Guide RNA in Kinetoplastid Editosomes.Homology-Based Modeling of Universal Stress Protein from Listeria innocua Up-Regulated under Acid Stress Conditions.Molecular Analysis of Factor VIII and Factor IX Genes in Hemophilia Patients: Identification of Novel Mutations and Molecular Dynamics Studies.Effect of solvent and protein dynamics in ligand recognition and inhibition of aminoglycoside adenyltransferase 2″-Ia.Combating Ebola with Repurposed Therapeutics Using the CANDO Platform.Geometric Simulation Approach for Grading and Assessing the Thermostability of CALBs.Effective protein model structure refinement by loop modeling and overall relaxation.Structural insights into leishmanolysins encoded on chromosome 10 of Leishmania (Viannia) braziliensis.The peptide agonist-binding site of the glucagon-like peptide-1 (GLP-1) receptor based on site-directed mutagenesis and knowledge-based modelling.Domain organization of DNase from Thioalkalivibrio sp. provides insights into retention of activity in high salt environments.In Silico Study of Variable Surface Proteins in Plasmodium Species: Perspectives in Drug Design.Additive effect of nuclear and mitochondrial mutations in a patient with mitochondrial encephalomyopathy.A family of archaea-like carboxylesterases preferentially expressed in the symbiotic phase of the mychorrizal fungus Tuber melanosporum.Structural basis for the regulatory interactions of proapoptotic Par-4.

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

http://www.wikidata.org/entity/Q30416490

description

2012 nî lūn-bûn

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2012 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2012 թվականի մայիսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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type

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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Nucleic Acids Research

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement.

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João P G L M Rodrigues

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P2860

Progress and challenges in protein structure prediction

Biopython: freely available Python tools for computational molecular biology and bioinformatics

LGA: A method for finding 3D similarities in protein structures

Principles that govern the folding of protein chains

Consistent refinement of submitted models at CASP using a knowledge-based potential

Progress and challenges in high-resolution refinement of protein structure models.

Near-native structure refinement using in vacuo energy minimization.

Solvent dramatically affects protein structure refinement.

Assessment of the protein-structure refinement category in CASP8

Assessment of protein structure refinement in CASP9.

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W323-8

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scholarly article

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10.1093/NAR/GKS376

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Web Server issue

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40

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2012-05-07T00:00:00Z

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224917345

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3394243

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