Empirical potentials and functions for protein folding and binding.
about
Protein docking along smooth association pathwaysInteratomic potentials and solvation parameters from protein engineering data for buried residuesStructural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complexThe role of hydrogen bonding via interfacial water molecules in antigen-antibody complexation. The HyHEL-10-HEL interactionImproving biophysical properties of a bispecific antibody scaffold to aid developabilityStatistical potential for assessment and prediction of protein structuresSelecting near-native conformations in homology modeling: the role of molecular mechanics and solvation termsA distance-dependent atomic knowledge-based potential for improved protein structure selection.Statistical potentials for fold assessment.Information-theoretic dissection of pairwise contact potentials.Development of unified statistical potentials describing protein-protein interactions.The role of geometric complementarity in secondary structure packing: a systematic docking study.Effect of chain connectivity on the structure of Lennard-Jones liquid and its implicationon statistical potentials for protein folding.Protein structure evaluation using an all-atom energy based empirical scoring function.Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys.Quantitative prediction of protein-protein binding affinity with a potential of mean force considering volume correction.A pairwise residue contact area-based mean force potential for discrimination of native protein structure.Absolute binding free energy calculations: on the accuracy of computational scoring of protein-ligand interactionsClustering of low-energy conformations near the native structures of small proteins.DrugScorePPI knowledge-based potentials used as scoring and objective function in protein-protein docking.Four distances between pairs of amino acids provide a precise description of their interactionPrediction of the binding energy for small molecules, peptides and proteins.Towards understanding the mechanisms of molecular recognition by computer simulations of ligand-protein interactions.Modeling loop entropy.Inclusion of solvation and entropy in the knowledge-based scoring function for protein-ligand interactionsA systematic study of low-resolution recognition in protein--protein complexesStatistical potential for modeling and ranking of protein-ligand interactionsPPCheck: A Webserver for the Quantitative Analysis of Protein-Protein Interfaces and Prediction of Residue HotspotsFree energies of protein decoys provide insight into determinants of protein stability.Docking of protein models.Kinetic and affinity predictions of a protein-protein interaction using multivariate experimental design.Functional group based Ligand binding affinity scoring function at atomic environmental level.An all-atom force field for tertiary structure prediction of helical proteins.Composites of local structure propensities: evidence for local encoding of long-range structure.Comparison of binding energies of SrcSH2-phosphotyrosyl peptides with structure-based prediction using surface area based empirical parameterization.Structure-based thermodynamic analysis of the dissociation of protein phosphatase-1 catalytic subunit and microcystin-LR docked complexes.Application of MM/PBSA colony free energy to loop decoy discrimination: toward correlation between energy and root mean square deviation.Propensities, probabilities, and the Boltzmann hypothesis.QSAR modelling of water quality indices of alkylphenol pollutants.Insight into the 3D structure of ADP-glucose pyrophosphorylase from rice (Oryza sativa L.).
P2860
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P2860
Empirical potentials and functions for protein folding and binding.
description
1997 nî lūn-bûn
@nan
1997 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
1997 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
1997年の論文
@ja
1997年論文
@yue
1997年論文
@zh-hant
1997年論文
@zh-hk
1997年論文
@zh-mo
1997年論文
@zh-tw
1997年论文
@wuu
name
Empirical potentials and functions for protein folding and binding.
@ast
Empirical potentials and functions for protein folding and binding.
@en
type
label
Empirical potentials and functions for protein folding and binding.
@ast
Empirical potentials and functions for protein folding and binding.
@en
prefLabel
Empirical potentials and functions for protein folding and binding.
@ast
Empirical potentials and functions for protein folding and binding.
@en
P1476
Empirical potentials and functions for protein folding and binding
@en
P2093
P304
P356
10.1016/S0959-440X(97)80029-2
P50
P577
1997-04-01T00:00:00Z