about
Whole-genome analyses resolve early branches in the tree of life of modern birdsThe Interrelationships of Placental Mammals and the Limits of Phylogenetic InferencePhylotranscriptomic analysis of the origin and early diversification of land plantsPhylogenomic analyses data of the avian phylogenomics projectPhylotastic! Making tree-of-life knowledge accessible, reusable and convenientHIPPI: highly accurate protein family classification with ensembles of HMMs.FastSP: linear time calculation of alignment accuracy.Data access for the 1,000 Plants (1KP) project.ASTRAL: genome-scale coalescent-based species tree estimation.BBCA: Improving the scalability of *BEAST using random binning.TIPP: taxonomic identification and phylogenetic profiling.PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid SequencesWeighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses.Response to Comment on "Whole-genome analyses resolve early branches in the tree of life of modern birds".Phylogenomic species tree estimation in the presence of incomplete lineage sorting and horizontal gene transfer.Ultra-large alignments using phylogeny-aware profiles.A comparative study of SVDquartets and other coalescent-based species tree estimation methods.Anchoring quartet-based phylogenetic distances and applications to species tree reconstruction.ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes.Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies.Response to Comment on "Statistical binning enables an accurate coalescent-based estimation of the avian tree".Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.MRL and SuperFine+MRL: new supertree methods.Fragmentary Gene Sequences Negatively Impact Gene Tree and Species Tree Reconstruction.Species tree estimation using ASTRAL: how many genes are enough?A communal catalogue reveals Earth's multiscale microbial diversity.Statistical binning enables an accurate coalescent-based estimation of the avian tree.Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting.A Two-State Model of Tree Evolution and its Applications to Alu Retrotransposition.Identifying the favored mutation in a positive selective sweep.DiscoVista: interpretable visualizations of gene tree discordance.A roadmap for global synthesis of the plant tree of life.Phylogenomics: Constrained gene tree inference.Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information.ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees.TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees.Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies.Assembly-free and alignment-free sample identification using genome skimsInterspecific Gene Flow Shaped the Evolution of the Genus CanisFAVITES: simultaneous simulation of transmission networks, phylogenetic trees, and sequences
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P50
description
hulumtues
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wetenschapper
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հետազոտող
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mir arabbaygi
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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Siavash Mirarab
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P166
P21
P31
P496
0000-0001-5410-1518