about
Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experimentsAssemblathon 2: evaluating de novo methods of genome assembly in three vertebrate speciesGramene 2016: comparative plant genomics and pathway resourcesPatterns of evolution at the gametophytic self-incompatibility Sorbus aucuparia (Pyrinae) S pollen genes support the non-self recognition by multiple factors modelEvolutionary patterns at the RNase based gametophytic self - incompatibility system in two divergent Rosaceae groups (Maloideae and Prunus)Amino acid pair- and triplet-wise groupings in the interior of α-helical segments in proteins.The Drosophila melanogaster methuselah gene: a novel gene with ancient functions.Tools for mapping high-throughput sequencing data.Protein evolution of ANTP and PRD homeobox genes.Gene classification based on amino acid motifs and residues: the DLX (distal-less) test caseAssemblathon 1: a competitive assessment of de novo short read assembly methods.High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interfaceExpression Atlas update--an integrated database of gene and protein expression in humans, animals and plants.RNA-Seq gene profiling--a systematic empirical comparison.Convergent evolution at the gametophytic self-incompatibility system in Malus and Prunus.Comparison of GENCODE and RefSeq gene annotation and the impact of reference geneset on variant effect prediction.The RNASeq-er API - a gateway to systematically updated analysis of public RNA-Seq data.Predicting malignancy from mammography findings and image-guided core biopsiesDrosophila americana as a model species for comparative studies on the molecular basis of phenotypic variation.Predicting Malignancy from Mammography Findings and Surgical Biopsies.Long-range enhancers regulating Myc expression are required for normal facial morphogenesis.PopAffiliator: online calculator for individual affiliation to a major population group based on 17 autosomal short tandem repeat genotype profile.A relational learning approach to Structure-Activity Relationships in drug design toxicity studies.Improving the performance of Transposable Elements detection tools.Predicting the secondary structure of proteins using machine learning algorithms.Expression Atlas: gene and protein expression across multiple studies and organisms.Gramene 2018: unifying comparative genomics and pathway resources for plant research.An S-RNase-based gametophytic self-incompatibility system evolved only once in eudicots.Improving the performance of Transposable Elements detection tools.Two independent modes of chromatin organization revealed by cohesin removal.Transcription factor activities enhance markers of drug sensitivity in cancer.ADOPS--Automatic Detection Of Positively Selected Sites.ADOPS - Automatic Detection Of Positively Selected Sites.Inferences on specificity recognition at the Malus×domestica gametophytic self-incompatibility system.Phylogeny of the teashirt-related zinc finger (tshz) gene family and analysis of the developmental expression of tshz2 and tshz3b in the zebrafish.The number, age, sharing and relatedness of S-locus specificities in Prunus.The DAIBAM MITE element is involved in the origin of one fixed and two polymorphic Drosophila virilis phylad inversions.Online resources for PCAWG data exploration, visualization, and discoveryAssessing the Effect of 2D Fingerprint Filtering on ILP-Based Structure-Activity Relationships Toxicity Studies in Drug DesignComparative Study of Classification Algorithms Using Molecular Descriptors in Toxicological DataBases
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Q26782012-29281C13-4C55-4364-B414-43318412833FQ27499265-C3B7175B-0265-43BC-9726-8B5F52BC5806Q28603077-7651AF80-B3EC-47FE-ACAE-D63CDFF3AD6CQ28703764-70727C0D-AF57-499F-BDC0-B3790F5955FBQ28750224-44E9D339-AE78-4817-BAF6-04A6A6ECEAB8Q30396986-7967BEB5-1EEE-4245-BA2C-ACC1033E038DQ30430883-CBE8F13F-759C-45E5-AAFF-639C9ED541A3Q30573120-BAA68D7F-BB98-4625-B84F-F06922AD596FQ33351061-A310F708-F348-4D7B-AA14-6BF083383B1DQ33457179-C3E923DE-DB5A-45B8-A472-4F921886239AQ34217144-CEF0ED14-1C07-406B-845E-CBB66E5CC987Q34439361-CBEAE841-2BA9-4CF2-8DEE-4C1C1A5A12B3Q34498575-BE6B9C4B-6955-4AAF-BC01-714F82AC237BQ35288892-A4590766-4DFD-4A64-8DD6-1478A9F6DBCBQ35625332-2F94E14C-1379-46A6-BEE6-D0FF559CF56DQ35673975-1A994B5F-589F-4B0D-8A3E-B1F73B822540Q36332136-4C50BF82-5A4A-4B6A-8DB5-82553FCCC6F3Q36609017-58347596-02B6-4089-83C9-4A6FF046F810Q36810524-01A48424-DFF7-43A8-9EFB-7C67EDA9C229Q37400692-149018BC-B9BF-43AA-8D8E-A94E2BBADDBBQ39186926-AC330905-9D00-47ED-9459-0735D266ED04Q39863386-9F3967BD-C8AF-4640-8E03-C36AF738AB4CQ45892709-5784A0FA-18E2-4E5D-950D-06E0B44FD89DQ45958183-62354A34-3826-4028-899B-FDB9928E783EQ45959731-B18138FE-F2B1-4884-A409-E33C2AC54F6AQ46256149-8B31C5E0-76A8-4533-BCBD-B62FA2761E81Q46256156-6268C928-B942-4BC6-8616-A6DD468751B2Q46256591-62BC06D6-FEEE-427C-B05F-774CD32AEFB2Q46971600-CF8E05C1-C22D-4024-8B3E-8968E19773D0Q47035974-BD887570-7B46-446F-943F-9A614B7C737FQ47327751-A2605984-A850-473E-97E5-E42FA1074A44Q47344571-2EEB3310-4F1B-49C4-A009-E8C893CEBC93Q47672708-F68190F4-6844-4110-8A88-DE43790580D6Q48147324-AA0F9748-80A9-49A9-B3A7-CB79854D90C3Q48330282-0D1F244E-FBCE-4ED0-95E9-C69160101BB9Q51714166-D24C4F30-19B8-4B2F-B086-5F1C2064F421Q52737244-7391D826-93BE-45D2-8A0B-4B74C6846AC8Q57004618-34521DCB-2ED0-40F8-B91F-F1A905A642D9Q57665546-42845F7F-499F-495D-826C-3D2D4B9E58B3Q57665556-1427459C-4A82-451C-93F3-1ED6CF20F5CA
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Nuno A Fonseca
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