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Differences between cotranscriptional and free riboswitch folding

Differences between cotranscriptional and free riboswitch folding

http://www.wikidata.org/entity/Q30572845

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Native structure-based modeling and simulation of biomolecular systems per mouse click.Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction.A Highly Coupled Network of Tertiary Interactions in the SAM-I Riboswitch and Their Role in Regulatory Tuning.Integrating molecular dynamics simulations with chemical probing experiments using SHAPE-FIT.Co-Transcriptional Folding and Regulation Mechanisms of Riboswitches.Contact Statistics Highlight Distinct Organizing Principles of Proteins and RNA Computational Methods for Modeling Aptamers and Designing Riboswitches.Cooperation between Magnesium and Metabolite Controls Collapse of the SAM-I Riboswitch.Revealing the global map of protein folding space by large-scale simulations.Simulation of FRET dyes allows quantitative comparison against experimental data.The regulation mechanism of yitJ and metF riboswitches.Generalized Manning Condensation Model Captures the RNA Ion Atmosphere.Life times of metastable states guide regulatory signaling in transcriptional riboswitches.

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P2860

Differences between cotranscriptional and free riboswitch folding

http://www.wikidata.org/entity/Q30572845

description

2013 nî lūn-bûn

@nan

2013 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

Differences between cotranscriptional and free riboswitch folding

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Differences between cotranscriptional and free riboswitch folding

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type

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Differences between cotranscriptional and free riboswitch folding

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Differences between cotranscriptional and free riboswitch folding

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prefLabel

Differences between cotranscriptional and free riboswitch folding

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Differences between cotranscriptional and free riboswitch folding

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Nucleic Acids Research

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Differences between cotranscriptional and free riboswitch folding

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P2093

Abhinav Verma

http://www.w3.org/2001/XMLSchema#string

Alexander Schug

http://www.w3.org/2001/XMLSchema#string

Benjamin Lutz

http://www.w3.org/2001/XMLSchema#string

Michael Faber

http://www.w3.org/2001/XMLSchema#string

P2860

Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria

The distributions, mechanisms, and structures of metabolite-binding riboswitches

Origin of life: The RNA world

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

Structure of the S-adenosylmethionine riboswitch regulatory mRNA element

Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs

Sensing Small Molecules by Nascent RNA

An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.

Multiple-basin energy landscapes for large-amplitude conformational motions of proteins: Structure-based molecular dynamics simulations.

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2687-2696

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10.1093/NAR/GKT1213

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4

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42

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