Structural refinement from restrained-ensemble simulations based on EPR/DEER data: application to T4 lysozyme.
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Computational modeling of membrane proteinsStructural Refinement of Proteins by Restrained Molecular Dynamics Simulations with Non-interacting Molecular Fragments.Constraint methods that accelerate free-energy simulations of biomoleculesDetermining protein structures by combining semireliable data with atomistic physical models by Bayesian inferenceNavigating Membrane Protein Structure, Dynamics, and Energy Landscapes Using Spin Labeling and EPR Spectroscopy.Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.Automated structure refinement for a protein heterodimer complex using limited EPR spectroscopic data and a rigid-body docking algorithm: a three-dimensional model for an ankyrin-CDB3 complexConformational dynamics of the nucleotide binding domains and the power stroke of a heterodimeric ABC transporter.Conformational dynamics of ligand-dependent alternating access in LeuT.Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes.Conformational cycle and ion-coupling mechanism of the Na+/hydantoin transporter Mhp1.A simple and fast approach for predicting (1)H and (13)C chemical shifts: toward chemical shift-guided simulations of RNASolid-State NMR-Restrained Ensemble Dynamics of a Membrane Protein in Explicit MembranesSimulating the distance distribution between spin-labels attached to proteinsResting state of the human proton channel dimer in a lipid bilayer.CHARMM-GUI PDB manipulator for advanced modeling and simulations of proteins containing nonstandard residues.Dynamics transitions at the outer vestibule of the KcsA potassium channel during gating.New developments in spin labels for pulsed dipolar EPR.MMM - A toolbox for integrative structure modelling.Drude Polarizable Force Field for Molecular Dynamics Simulations of Saturated and Unsaturated Zwitterionic LipidsCHARMM-GUI 10 years for biomolecular modeling and simulation.Alternating access mechanisms of LeuT-fold transporters: trailblazing towards the promised energy landscapes.Characterization of the Domain Orientations of E. coli 5'-Nucleotidase by Fitting an Ensemble of Conformers to DEER Distance Distributions.Ensemble-Biased Metadynamics: A Molecular Simulation Method to Sample Experimental Distributions.Determination of helix orientations in a flexible DNA by multi-frequency EPR spectroscopy.Synthesis and conformational properties of a TOAC doubly spin-labeled analog of the medium-length, membrane active peptaibiotic ampullosporin A as revealed by CD, fluorescence, and EPR spectroscopies.Conformational transitions of the sodium-dependent sugar transporter, vSGLT.Slow Dynamics around a Protein and Its Coupling to Solvent.Confidence Analysis of DEER Data and Its Structural Interpretation with Ensemble-Biased MetadynamicsMolecular dynamics ensemble refinement of the heterogeneous native state of NCBD using chemical shifts and NOEs
P2860
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P2860
Structural refinement from restrained-ensemble simulations based on EPR/DEER data: application to T4 lysozyme.
description
2013 nî lūn-bûn
@nan
2013 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Structural refinement from res ...... a: application to T4 lysozyme.
@ast
Structural refinement from res ...... a: application to T4 lysozyme.
@en
type
label
Structural refinement from res ...... a: application to T4 lysozyme.
@ast
Structural refinement from res ...... a: application to T4 lysozyme.
@en
prefLabel
Structural refinement from res ...... a: application to T4 lysozyme.
@ast
Structural refinement from res ...... a: application to T4 lysozyme.
@en
P2093
P2860
P356
P1476
Structural refinement from res ...... a: application to T4 lysozyme.
@en
P2093
Benoît Roux
Hassane S McHaourab
Richard A Stein
Shahidul M Islam
P2860
P304
P356
10.1021/JP311723A
P407
P577
2013-04-11T00:00:00Z