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Mapping differential interactomes by affinity purification coupled with data-independent mass spectrometry acquisition.

Mapping differential interactomes by affinity purification coupled with data-independent mass spectrometry acquisition.

http://www.wikidata.org/entity/Q30684680

about

The development and application of a quantitative peptide microarray based approach to protein interaction domain specificity space Human Pituitary Adenoma Proteomics: New Progresses and Perspectives Proteomics-Based Analysis of Protein Complexes in Pluripotent Stem Cells and Cancer Biology Technical advances in proteomics: new developments in data-independent acquisition Illuminating Spatial and Temporal Organization of Protein Interaction Networks by Mass Spectrometry-Based Proteomics Human protein interaction networks across tissues and diseases Quantitative affinity purification mass spectrometry: a versatile technology to study protein-protein interactions Advances in targeted proteomics and applications to biomedical research Emerging proteomic technologies for elucidating context-dependent cellular signaling events: A big challenge of tiny proportions Selective targeting of the stress chaperome as a therapeutic strategy Evaluation of iTRAQ and SWATH-MS for the Quantification of Proteins Associated with Insulin Resistance in Human Duodenal Biopsy Samples Network biology concepts in complex disease comorbidities On-beads digestion in conjunction with data-dependent mass spectrometry: a shortcut to quantitative and dynamic interaction proteomics A web-tool for visualizing quantitative protein-protein interaction data.DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics Targeted phosphoproteomics of insulin signaling using data-independent acquisition mass spectrometry.Reproducible quantitative proteotype data matrices for systems biology.MSPLIT-DIA: sensitive peptide identification for data-independent acquisition.SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.Data Independent Acquisition analysis in ProHits 4.0.Untargeted, spectral library-free analysis of data-independent acquisition proteomics data generated using Orbitrap mass spectrometers.Effect of peptide assay library size and composition in targeted data-independent acquisition-MS analyses.Generation of High-Quality SWATH® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF® Mass Spectrometers.Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness.Definition of a RACK1 Interaction Network in Drosophila melanogaster Using SWATH-MS Systems cell biology.An alternative splicing event amplifies evolutionary differences between vertebrates.A new in vivo cross-linking mass spectrometry platform to define protein-protein interactions in living cells.A repository of assays to quantify 10,000 human proteins by SWATH-MS.Recent advances in proteomics: towards the human proteome.Using data-independent, high-resolution mass spectrometry in protein biomarker research: perspectives and clinical applications.SWATH enables precise label-free quantification on proteome scale.specL--an R/Bioconductor package to prepare peptide spectrum matches for use in targeted proteomics.An LXR-NCOA5 gene regulatory complex directs inflammatory crosstalk-dependent repression of macrophage cholesterol efflux.Applying SWATH Mass Spectrometry to Investigate Human Cervicovaginal Fluid During the Menstrual Cycle.Immunocapture-Selected Reaction Monitoring Screening Facilitates the Development of ELISA for the Measurement of Native TEX101 in Biological Fluids Label-free Quantitative Analysis of Changes in Broiler Liver Proteins under Heat Stress using SWATH-MS Technology.Do hypoxia/normoxia culturing conditions change the neuroregulatory profile of Wharton Jelly mesenchymal stem cell secretome?Proteome-wide drug and metabolite interaction mapping by thermal-stability profiling.SWATH-MS as a tool for biomarker discovery - from basic research to clinical applications.

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P2860

Mapping differential interactomes by affinity purification coupled with data-independent mass spectrometry acquisition.

http://www.wikidata.org/entity/Q30684680

description

2013 nî lūn-bûn

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2013 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2013 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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Gordana Ivosev

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Tony Pawson

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Zhen-Yuan Lin

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P2860

Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition

Selected reaction monitoring mass spectrometry reveals the dynamics of signaling through the GRB2 adaptor

Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme

A new regulatory motif in cell-cycle control causing specific inhibition of cyclin D/CDK4

Disease mutations in disordered regions--exception to the rule?

4,5-diarylisoxazole Hsp90 chaperone inhibitors: potential therapeutic agents for the treatment of cancer

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation

High-throughput mapping of a dynamic signaling network in mammalian cells

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1239-1245

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10.1038/NMETH.2702

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12

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Anne-Claude Gingras

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Ruedi Aebersold

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