Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.
about
Annotation error in public databases: misannotation of molecular function in enzyme superfamiliesFunctional classification using phylogenomic inferenceCharProtDB: a database of experimentally characterized protein annotationsIdentification of genes encoding tRNA modification enzymes by comparative genomicsGenomics of bacteria and archaea: the emerging dynamic view of the prokaryotic worldTowards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs)Applying Support Vector Machines for Gene Ontology based gene function predictionRIO: analyzing proteomes by automated phylogenomics using resampled inference of orthologs.The 'permeome' of the malaria parasite: an overview of the membrane transport proteins of Plasmodium falciparum.Clustering the annotation space of proteinsPCAS--a precomputed proteome annotation database resourceNew knowledge from old: in silico discovery of novel protein domains in Streptomyces coelicolorGene fusions and gene duplications: relevance to genomic annotation and functional analysisProtein molecular function prediction by Bayesian phylogenomics.MaGe: a microbial genome annotation system supported by synteny resultsUsing biological networks to improve our understanding of infectious diseasesOn the Extent and Origins of Genic Novelty in the Phylum NematodaThe Pfam protein families database.ESG: extended similarity group method for automated protein function predictionEvolution of bacterial phosphoglycerate mutases: non-homologous isofunctional enzymes undergoing gene losses, gains and lateral transfersCan inferred provenance and its visualisation be used to detect erroneous annotation? A case study using UniProtKBGetting started in structural phylogenomicsPrediction of enzyme function based on 3D templates of evolutionarily important amino acids.Combining heterogeneous data sources for accurate functional annotation of proteins.The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches.Structural proteomics of minimal organisms: conservation of protein fold usage and evolutionary implicationsMACSIMS: multiple alignment of complete sequences information management systemBroad issues to consider for library involvement in bioinformaticsHigh precision multi-genome scale reannotation of enzyme function by EFICAz.FlowerPower: clustering proteins into domain architecture classes for phylogenomic inference of protein function.Estimating the annotation error rate of curated GO database sequence annotations.Applying negative rule mining to improve genome annotationAutomated protein subfamily identification and classification.Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea.De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural featuresProtein subfamily assignment using the Conserved Domain DatabaseOxyGene: an innovative platform for investigating oxidative-response genes in whole prokaryotic genomesA subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life.HangOut: generating clean PSI-BLAST profiles for domains with long insertionsEvolutionary trace annotation of protein function in the structural proteome.
P2860
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P2860
Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.
description
1998 nî lūn-bûn
@nan
1998 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
1998 թվականի հունվարին հրատարակված գիտական հոդված
@hy
1998年の論文
@ja
1998年論文
@yue
1998年論文
@zh-hant
1998年論文
@zh-hk
1998年論文
@zh-mo
1998年論文
@zh-tw
1998年论文
@wuu
name
Sources of systematic error in ...... acement and operon disruption.
@ast
Sources of systematic error in ...... acement and operon disruption.
@en
type
label
Sources of systematic error in ...... acement and operon disruption.
@ast
Sources of systematic error in ...... acement and operon disruption.
@en
prefLabel
Sources of systematic error in ...... acement and operon disruption.
@ast
Sources of systematic error in ...... acement and operon disruption.
@en
P1433
P1476
Sources of systematic error in ...... lacement and operon disruption
@en
P2093
P577
1998-01-01T00:00:00Z