Bridger: a new framework for de novo transcriptome assembly using RNA-seq data. - Wikidata - wikimedia - TriplyDB

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

http://www.wikidata.org/entity/Q30901343

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Utilizing de Bruijn graph of metagenome assembly for metatranscriptome analysis Elucidating and mining the Tulipa and Lilium transcriptomes.Evolution of Chemosensory Gene Families in Arthropods: Insight from the First Inclusive Comparative Transcriptome Analysis across Spider Appendages Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species.BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data Characterizing and annotating the genome using RNA-seq data.-Omic and Electronic Health Record Big Data Analytics for Precision Medicine.MarpoDB: An Open Registry for Marchantia Polymorpha Genetic Parts.Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly.Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome.Comparison of De Novo Transcriptome Assemblers and k-mer Strategies Using the Killifish, Fundulus heteroclitus.Combining independent de novo assemblies optimizes the coding transcriptome for nonconventional model eukaryotic organisms.Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing.EXPath tool-a system for comprehensively analyzing regulatory pathways and coexpression networks from high-throughput transcriptome data.Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for Anchored Phylogenomics.Long non-coding RNAs in innate and adaptive immunity.Pseudo-Reference-Based Assembly of Vertebrate Transcriptomes Informed kmer selection for de novo transcriptome assembly Genome Sequence of the Historical Clinical Isolate Burkholderia pseudomallei PHLS 6 De novo Sequencing and Transcriptome Analysis of Pinellia ternata Identify the Candidate Genes Involved in the Biosynthesis of Benzoic Acid and Ephedrine.TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs.YeATSAM analysis of the walnut and chickpea transcriptome reveals key genes undetected by current annotation tools Analysis of repetitive amino acid motifs reveals the essential features of spider dragline silk proteins.Serine protease-related proteins in the malaria mosquito, Anopheles gambiae.High-confidence coding and noncoding transcriptome maps.CASH: a constructing comprehensive splice site method for detecting alternative splicing events.YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut.De novo Assembly of the Camellia nitidissima Transcriptome Reveals Key Genes of Flower Pigment Biosynthesis deBGR: an efficient and near-exact representation of the weighted de Bruijn graph.K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity.ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole genome sequencing data.High fidelity hypothermic preservation of primary tissues in organ transplant preservative for single cell transcriptome analysis.Retrospective Identification of Herpes Simplex 2 Virus-Associated Acute Liver Failure in an Immunocompetent Patient Detected Using Whole Transcriptome Shotgun Sequencing.Long Noncoding RNA Discovery in Cardiovascular Disease: Decoding Form to Function.The Draft Genome of the Invasive Walking Stick, Medauroidea extradendata, Reveals Extensive Lineage-Specific Gene Family Expansions of Cell Wall Degrading Enzymes in Phasmatodea.Anchored phylogenomics illuminates the skipper butterfly tree of life.IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing.Cotton rat lung transcriptome reveals host immune response to Respiratory Syncytial Virus infection Transcriptomic analysis of male and female Schistosoma mekongi adult worms De novo assembly, characterization, functional annotation and expression patterns of the black tiger shrimp (Penaeus monodon) transcriptome

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Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

http://www.wikidata.org/entity/Q30901343

description

2015 nî lūn-bûn

@nan

2015 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2015 թվականի փետրվարին հրատարակված գիտական հոդված

@hy

2015年の論文

@ja

2015年論文

@yue

2015年論文

@zh-hant

2015年論文

@zh-hk

2015年論文

@zh-mo

2015年論文

@zh-tw

2015年论文

@wuu

name

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

@ast

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

@en

type

label

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

@ast

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

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prefLabel

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

@ast

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

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Bridger: a new framework for de novo transcriptome assembly using RNA-seq data.

@en

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Carole L Cramer

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Deli Liu

http://www.w3.org/2001/XMLSchema#string

Guojun Li

http://www.w3.org/2001/XMLSchema#string

Juntao Liu

http://www.w3.org/2001/XMLSchema#string

Xiuzhen Huang

http://www.w3.org/2001/XMLSchema#string

Yu Zhang

http://www.w3.org/2001/XMLSchema#string

Zheng Chang

http://www.w3.org/2001/XMLSchema#string

P2860

RNA-Seq: a revolutionary tool for transcriptomics

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

TopHat: discovering splice junctions with RNA-Seq

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

BLAT--the BLAST-like alignment tool

Sequencing technologies - the next generation

SOAP2: an improved ultrafast tool for short read alignment

ABySS: a parallel assembler for short read sequence data

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