Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data - Wikidata - wikimedia - TriplyDB

Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data

Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data

http://www.wikidata.org/entity/Q30950209

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Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles Comparison of co-expression measures: mutual information, correlation, and model based indices Bioinformatics and systems biology of the lipidome A computational approach for ordering signal transduction pathway components from genomics and proteomics Data Regulatory network inferred using expression data of small sample size: application and validation in erythroid system Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks Efficient network reconstruction from dynamical cascades identifies small-world topology of neuronal avalanches Detecting separate time scales in genetic expression data Incorporating genome-scale tools for studying energy homeostasis.Inference of dynamic networks using time-course data.Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data.Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle.Selection of thermodynamic models for combinatorial control of multiple transcription factors in early differentiation of embryonic stem cells Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics Embedding mRNA stability in correlation analysis of time-series gene expression data Systematic identification of yeast cell cycle transcription factors using multiple data sources.Deciphering the transcriptional circuitry of microRNA genes expressed during human monocytic differentiation.Network inference and network response identification: moving genome-scale data to the next level of biological discovery Inference of gene regulatory networks using time-series data: a survey Global analysis of phase locking in gene expression during cell cycle: the potential in network modeling.A computational framework for gene regulatory network inference that combines multiple methods and datasets A novel method to identify cooperative functional modules: study of module coordination in the Saccharomyces cerevisiae cell cycle Time-course analysis of cyanobacterium transcriptome: detecting oscillatory genes.Molecular ecological network analyses.The inferred cardiogenic gene regulatory network in the mammalian heart.A novel, dynamic pattern-based analysis of NF-κB binding during the priming phase of liver regeneration reveals switch-like functional regulation of target genes.Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response Inference of gene interaction networks using conserved subsequential patterns from multiple time course gene expression datasets A parallel algorithm for reverse engineering of biological networks.Resolving host-pathogen interactions by dual RNA-seq.Linking the signaling cascades and dynamic regulatory networks controlling stress responses.Kinetic laws, phase-phase expansions, renormalization group, and INR calibration.Integrated inference and analysis of regulatory networks from multi-level measurements.A pattern recognition approach to infer time-lagged genetic interactions.Angiogenesis gene expression in murine endothelial cells during post-pneumonectomy lung growth Transcription factor network reconstruction using the living cell array Algorithms for modeling global and context-specific functional relationship networks.Characterization of early autophagy signaling by quantitative phosphoproteomics A Computational Method for Identifying Yeast Cell Cycle Transcription Factors.

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Elucidation of gene interaction networks through time-lagged correlation analysis of transcriptional data

http://www.wikidata.org/entity/Q30950209

description

2004 nî lūn-bûn

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2004 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2004 թվականի օգոստոսին հրատարակված գիտական հոդված

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2004年の論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年论文

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Elucidation of gene interactio ...... alysis of transcriptional data

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Elucidation of gene interactio ...... alysis of transcriptional data

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Elucidation of gene interactio ...... alysis of transcriptional data

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Elucidation of gene interactio ...... alysis of transcriptional data

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Elucidation of gene interactio ...... alysis of transcriptional data

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Elucidation of gene interactio ...... alysis of transcriptional data

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Genome Research

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Elucidation of gene interactio ...... alysis of transcriptional data

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Gregory Stephanopoulos

http://www.w3.org/2001/XMLSchema#string

R Michael Raab

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William A Schmitt

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P2860

Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding Regions

Cluster analysis and display of genome-wide expression patterns

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

Vector algebra in the analysis of genome-wide expression data

The transcriptional program of sporulation in budding yeast.

Principal components analysis to summarize microarray experiments: application to sporulation time series

The transcriptional program in the response of human fibroblasts to serum

Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

Singular value decomposition for genome-wide expression data processing and modeling

Exploring expression data: identification and analysis of coexpressed genes

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1654-1663

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10.1101/GR.2439804

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509275

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