tcR: an R package for T cell receptor repertoire advanced data analysis. - Wikidata - wikimedia - TriplyDB

tcR: an R package for T cell receptor repertoire advanced data analysis.

tcR: an R package for T cell receptor repertoire advanced data analysis.

http://www.wikidata.org/entity/Q30959837

about

High-throughput sequencing of immune repertoires in multiple sclerosis High-Throughput Sequencing-Based Immune Repertoire Study during Infectious Disease VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data.3D: diversity, dynamics, differential testing - a proposed pipeline for analysis of next-generation sequencing T cell repertoire data Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences Vidjil: A Web Platform for Analysis of High-Throughput Repertoire Sequencing ClonoCalc and ClonoPlot: immune repertoire analysis from raw files to publication figures with graphical user interface.CD40 Stimulation Obviates Innate Sensors and Drives T Cell Immunity in Cancer.T cell receptor repertoire usage in cancer as a surrogate marker for immune responses.Human TCR-MHC coevolution after divergence from mice includes increased nontemplate-encoded CDR3 diversity.Overview of methodologies for T-cell receptor repertoire analysis.High-throughput sequencing of the T-cell receptor repertoire: pitfalls and opportunities.Temporal Expression of Bim Limits the Development of Agonist-Selected Thymocytes and Skews Their TCRβ Repertoire.Monitoring multiple myeloma by next-generation sequencing of V(D)J rearrangements from circulating myeloma cells and cell-free myeloma DNA.T Cell Receptor Profiling in Type 1 Diabetes.Immune Repertoire after Immunization As Seen by Next-Generation Sequencing and Proteomics.T cell receptor β-chains display abnormal shortening and repertoire sharing in type 1 diabetes.Three distinct developmental pathways for adaptive and two IFN-γ-producing γδ T subsets in adult thymus.Radiotherapy and CTLA-4 Blockade Shape the TCR Repertoire of Tumor-Infiltrating T Cells.Adipose Tissue is Enriched for Activated and Late-Differentiated CD8+ T Cells and Shows Distinct CD8+ Receptor Usage, Compared With Blood in HIV-Infected Persons.Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires.Oligoclonal T-cell Receptor Repertoire in Colonic Biopsies of Patients with Microscopic Colitis and Ulcerative Colitis.Recasting Human Vδ1 Lymphocytes in an Adaptive Role.Human γδ T Cell Receptor Repertoires in Peripheral Blood Remain Stable Despite Clearance of Persistent Hepatitis C Virus Infection by Direct-Acting Antiviral Drug Therapy.IRProfiler - a software toolbox for high throughput immune receptor profiling.BRepertoire: a user-friendly web server for analysing antibody repertoire data.Analyzing Immunoglobulin Repertoires.CD154 Costimulation Shifts the Local T-Cell Receptor Repertoire Not Only During Thymic Selection but Also During Peripheral T-Dependent Humoral Immune Responses.RepSeq Data Representativeness and Robustness Assessment by Shannon Entropy.The transcription factors Runx3 and ThPOK cross-regulate acquisition of cytotoxic function by human Th1 lymphocytes.

P2860

Q26747682-A71C9F9E-C52E-409C-B94F-5CABC77B71AC Q28068214-E03E9FB6-215D-48EF-9CC3-14D7A672BE5B Q28843105-0ACA9CDA-635A-4ED7-92F5-08E84998FF50 Q31156257-E4C70A63-053F-41A5-B9A4-349670BEE277 Q31167209-0E63D41A-F410-4104-8C5C-8C7A9D7973CE Q33879504-4FCAFD4A-BEEB-41AB-8219-329EEFADAABD Q36174633-6283A3EB-53E1-4114-9D57-5F27B93E6406 Q36189979-D5E988BF-0331-4429-848E-2B42FB1ED639 Q36305105-2A042CE4-9697-4FE6-B6BF-7646F8895522 Q37029731-A2155752-0176-4A16-9BCE-25869DD528AF Q38376433-C4F462E5-6D92-4C46-908F-4C985F7C11C1 Q38611225-F7C15862-EB91-4BBE-B502-7704FA2277E1 Q38685855-3D94D266-7673-4705-A8CA-60FC2D9DA348 Q39026323-5D28E740-CAA5-4FB5-8D42-1A098CCBEFB0 Q41502539-D9A5644E-7821-4083-88A0-6B9F8331457E Q42234608-8C31286B-19FC-4193-BB3A-6B49B415BF01 Q42374922-B2B170FB-F1AC-47DE-B8A2-1A488A134A82 Q43078379-AEEAEDFD-B15E-4ABE-B82B-EAB52A7DFC28 Q47156078-D5B336C2-F52D-40F3-9BDB-C63B94D5FF58 Q47170298-7311D5AD-1804-4827-BC96-F01D2FA0F7E0 Q47405972-D0BEC719-BDB1-42CD-B809-E30721E3EEC0 Q47609834-F4BC517A-A56A-4743-A0BE-81D304FD2CC4 Q50420437-E31DCCB6-495D-45BD-B9B7-F12DE2305DE5 Q52095380-379058E4-7A44-4DBA-A416-5EA894FC1F86 Q52313512-09C245D5-A2B5-4D67-B0BB-D11D3A7FA415 Q52332749-EEFC7CC9-DA98-47EE-B29F-86DEADFDB223 Q52579987-4454F62B-09DD-482C-94EF-F158DC636E87 Q52580331-644C3891-A2C4-481C-91EC-214431802D18 Q52723424-806D49E4-E25C-4789-9A3D-6E5494299E9F Q54940553-571B052A-0DFE-466F-A594-7D2F36430999 Q55259826-16049059-FDF5-46FD-B426-10DAB5DE4DE1 Q55437604-BEA1D93D-7C9C-41EB-8FB8-C0A421171691

P2860

tcR: an R package for T cell receptor repertoire advanced data analysis.

http://www.wikidata.org/entity/Q30959837

description

2015 nî lūn-bûn

@nan

2015 թուականի Մայիսին հրատարակուած գիտական յօդուած

@hyw

2015 թվականի մայիսին հրատարակված գիտական հոդված

@hy

2015年の論文

@ja

2015年論文

@yue

2015年論文

@zh-hant

2015年論文

@zh-hk

2015年論文

@zh-mo

2015年論文

@zh-tw

2015年论文

@wuu

name

tcR: an R package for T cell receptor repertoire advanced data analysis.

@ast

tcR: an R package for T cell receptor repertoire advanced data analysis.

@en

type

label

tcR: an R package for T cell receptor repertoire advanced data analysis.

@ast

tcR: an R package for T cell receptor repertoire advanced data analysis.

@en

prefLabel

tcR: an R package for T cell receptor repertoire advanced data analysis.

@ast

tcR: an R package for T cell receptor repertoire advanced data analysis.

@en

P1433

Q30959837-195D8481-91D0-415D-A415-67B007D3AB68

P1476

Q30959837-A834D58A-1534-4FF3-947D-A05F5A557B8C

P2093

Q30959837-3C31DE66-2F14-40D1-99D0-C2536D4E8764

Q30959837-E6673A7F-002D-47E4-99BF-D315702169A5

Q30959837-FD2E03D2-1392-42D4-B737-9E13788851E6

P2860

Q30959837-00F578C6-C89D-4E7B-BE42-7D5EE03C920E

Q30959837-07B2012E-9205-4E82-AB65-A2B04B76A6AA

Q30959837-07EF3E29-1F02-456F-9B2F-C48E45D3DE65

Q30959837-1035D8CA-987A-42F5-A2AF-4A5A0CDA02AA

Q30959837-34C169FC-15E9-467C-888F-1944EECF5A06

Q30959837-68A42823-2522-4239-8671-BF582F6522CF

Q30959837-7706C2E9-6F08-4B5E-9078-7F8B212E86A7

Q30959837-85155EF1-7801-4E16-BB07-6FAEB92EF016

Q30959837-8A31CDB6-2D45-4867-9BD5-E3891342CF88

Q30959837-8D5F241C-0D11-43F0-9CAD-5613AC7D29C6

P2888

Q30959837-B2D47EC1-F8F2-4D67-83F3-33CDFE5F6CD5

P304

Q30959837-B4463F84-B9E1-4662-9CB4-317DB262EBE7

P31

Q30959837-973FA598-001E-486C-832A-35F9946CDF71

P356

Q30959837-CE0F5320-C9AC-45EA-A920-0F8EAA40F15C

P478

Q30959837-3572DF9A-B6FA-40EC-9A72-2323AB02D118

P50

Q30959837-0DA608AC-D345-480E-A853-1BCEB5ED3715

Q30959837-63513208-9A7B-4BE0-AEA3-B9B46B3B85F8

Q30959837-6FE74D6D-76BA-41BC-8EB8-443D1FBBC341

Q30959837-8F2B7115-8B44-4D96-9D87-CD60AEF02873

Q30959837-BFACACEE-37A9-4A3B-81D7-7A2E73214B82

Q30959837-BFBB64E3-7E1A-425F-8DA3-18D40D12A16E

P577

Q30959837-4A8A0A09-84C6-4F43-996C-EBDD1A0FD9C5

P5875

Q30959837-616D9DC8-CAE7-43C9-91E7-E24D991CAA5C

P6179

Q30959837-6768F787-C81B-4EFC-9509-CB1EA7C82389

P698

Q30959837-C1F5E37C-455F-4447-88C3-554CC15900E9

P921

Q30959837-3D62F008-8B47-4558-81C5-1E9DDECAFF81

P932

Q30959837-0F8D5C50-B1CB-4B8E-9285-9FD65F2A1138

P356

S12859-015-0613-1

P1433

BMC Bioinformatics

P1476

tcR: an R package for T cell receptor repertoire advanced data analysis

@en

P2093

Ekaterina A Komech

http://www.w3.org/2001/XMLSchema#string

Ilgar Z Mamedov

http://www.w3.org/2001/XMLSchema#string

Ivan V Zvyagin

http://www.w3.org/2001/XMLSchema#string

P2860

T-cell antigen receptor genes and T-cell recognition

iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences.

High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets.

Identification of errors introduced during high throughput sequencing of the T cell receptor repertoire.

Quantitative tracking of T cell clones after haematopoietic stem cell transplantation.

IMGT(®) tools for the nucleotide analysis of immunoglobulin (IG) and T cell receptor (TR) V-(D)-J repertoires, polymorphisms, and IG mutations: IMGT/V-QUEST and IMGT/HighV-QUEST for NGS.

Decombinator: a tool for fast, efficient gene assignment in T-cell receptor sequences using a finite state machine.

IgBLAST: an immunoglobulin variable domain sequence analysis tool

Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing.

Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing.

P2888

s12859-015-0613-1

P304

175

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1186/S12859-015-0613-1

http://www.w3.org/2001/XMLSchema#string

P478

16

http://www.w3.org/2001/XMLSchema#string

P50

Dmitriy Chudakov

Vadim I. Nazarov

Dmitry A. Bolotin

Mikhail V Pogorelyy

P577

2015-05-28T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

277312251

http://www.w3.org/2001/XMLSchema#string

P6179

1005135240

http://www.w3.org/2001/XMLSchema#string

P698

26017500

http://www.w3.org/2001/XMLSchema#string

P921

P932

4445501

http://www.w3.org/2001/XMLSchema#string