Large-scale discovery of promoter motifs in Drosophila melanogaster
about
NestedMICA as an ab initio protein motif discovery toolDoes positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modulesThe two most common histological subtypes of malignant germ cell tumour are distinguished by global microRNA profiles, associated with differential transcription factor expressionFootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces.Complex interplay of evolutionary forces in the ladybird homeobox genes of Drosophila melanogaster.Nested sampling for parameter inference in systems biology: application to an exemplar circadian model.Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers.Complex organizational structure of the genome revealed by genome-wide analysis of single and alternative promoters in Drosophila melanogaster.iMotifs: an integrated sequence motif visualization and analysis environment.Evolutionary mirages: selection on binding site composition creates the illusion of conserved grammars in Drosophila enhancersPromoting developmental transcription.Metamotifs--a generative model for building families of nucleotide position weight matrices.Turnover and lineage-specific broadening of the transcription start site in a testis-specific retrogene.Three enhancements to the inference of statistical protein-DNA potentials.Simple Shared Motifs (SSM) in conserved region of promoters: a new approach to identify co-regulation patterns.Profile-based short linear protein motif discovery.The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes.Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution.Genome-wide prediction and validation of sigma70 promoters in Lactobacillus plantarum WCFS1CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomesCOPS: detecting co-occurrence and spatial arrangement of transcription factor binding motifs in genome-wide datasets.Genome-wide prediction and functional validation of promoter motifs regulating gene expression in spore and infection stages of Phytophthora infestans.REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in Drosophila.Genome-wide computational prediction and analysis of core promoter elements across plant monocots and dicots.Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.iRegulon: from a gene list to a gene regulatory network using large motif and track collections.An affinity-structure database of helix-turn-helix: DNA complexes with a universal coordinate system.Cis regulatory motifs and antisense transcriptional control in the apicomplexan Theileria parva.Genome-Wide Ultrabithorax Binding Analysis Reveals Highly Targeted Genomic Loci at Developmental Regulators and a Potential Connection to Polycomb-Mediated Regulationi-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules.PRISM offers a comprehensive genomic approach to transcription factor function predictionJuvenile hormone and its receptor, methoprene-tolerant, control the dynamics of mosquito gene expressionMeasuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationshipsRule-based clustering for gene promoter structure discovery.Quality of regulatory elements in Drosophila retrogenes.Conserved Transcription Factors Steer Growth-Related Genomic Programs in Daphnia.RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections.Promoter Architecture and Sex-Specific Gene Expression in Daphnia pulex.Dynamic CRM occupancy reflects a temporal map of developmental progression.Specificity of Notch pathway activation: twist controls the transcriptional output in adult muscle progenitors.
P2860
Q21284207-9EC4ABE3-AE06-4F98-88A7-2AF4822833D8Q21563386-A6D18E22-B72C-49DF-A50C-EBFF8996E2DDQ28384874-E5E740F3-F6C4-4E79-9AF1-EC9F1B1CB142Q30489754-4B8DF548-2F42-4C17-9D31-BD42C0522CB7Q31028671-3151344C-271A-4920-9B44-9D8674B87CEBQ31124898-2F982E53-295A-466B-A805-E6F477879A4DQ33357061-822C0428-08BA-4A5A-8319-CB07D56445FBQ33398184-AFEE7745-AAFD-41DB-85F4-BB883196849BQ33526932-FBA13011-D58D-4F39-98FF-F8F6CCDFF017Q33526988-5DAA3AA4-2254-43B6-A6C5-6BBE6B81B05EQ33552391-9CFFF091-8967-4D25-8C18-8B7765B00CA8Q33616776-E81B410E-8D94-4DF1-9016-E16AF4540A24Q33794100-738B0B9C-A335-4023-9E5B-0ADBD56B0BA8Q33926211-3C185452-EC3D-45E6-A172-66C0FC730F29Q34017089-A8636A45-E47F-446C-A6A5-40808486C237Q34274351-79E060B7-92DC-4AB6-A5B3-54138439F99FQ34416318-FD194C87-7B13-4D81-B644-79FD9C45E266Q34423553-A12D4876-6FBA-47EC-9C05-3204FE7AD494Q34428075-3386D597-E890-45D3-84A4-F8539EF616B0Q34507907-719225C2-D6E1-405B-9D34-1F86D1793F1DQ34525951-2275A0A7-7C28-401A-A604-590F71BF9851Q34629124-63EA3B04-13C7-4BFB-8504-0C32E6E51AB0Q34718350-61E496C0-FBAB-499C-B80E-BBC113B3BE85Q35036891-92C3F213-59C1-41C5-B20B-070886388FD3Q35158705-17701820-A016-4966-8F0A-C57C48F649A6Q35212382-30E2314A-EAC5-4DBD-9AF6-2ABEF5BB6C8BQ35846699-6C6D1FF6-B3CC-4177-B9E9-612B890E606FQ35929213-AB5440EA-C5AF-4C9D-87A8-C085CEB6EDB5Q36117138-FE8DA490-EA3A-42A2-BADC-EF1DA158FE29Q36180297-4ADA45E5-3BF5-4EB7-B1F8-D381856BC700Q36800460-F500FF72-BBDE-4FC6-AA6C-3A3078898E22Q36932418-183B51E9-31FB-481F-A85A-7EADE058F478Q37273674-C4F84464-18F8-4697-9755-E1C367EDAC45Q37352495-16A2361C-592F-4292-85C9-F02177A6B440Q37365563-8FC077AE-153E-448B-9975-C1ED0B76CE5BQ38429205-F97891E3-EBD8-4C8F-A86B-344C2AC30C83Q38737869-FE5F65A0-3606-42D2-B5EC-5692967353CFQ41642383-98A699C7-3CED-4988-B90B-D35FA24EE20EQ42619112-CCE04D99-CC37-49B2-A340-C4D9E583250EQ42700397-560DF02A-7C30-4DC5-A522-967612E22862
P2860
Large-scale discovery of promoter motifs in Drosophila melanogaster
description
2006 nî lūn-bûn
@nan
2006 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
name
Large-scale discovery of promoter motifs in Drosophila melanogaster
@ast
Large-scale discovery of promoter motifs in Drosophila melanogaster
@en
Large-scale discovery of promoter motifs in Drosophila melanogaster.
@nl
type
label
Large-scale discovery of promoter motifs in Drosophila melanogaster
@ast
Large-scale discovery of promoter motifs in Drosophila melanogaster
@en
Large-scale discovery of promoter motifs in Drosophila melanogaster.
@nl
prefLabel
Large-scale discovery of promoter motifs in Drosophila melanogaster
@ast
Large-scale discovery of promoter motifs in Drosophila melanogaster
@en
Large-scale discovery of promoter motifs in Drosophila melanogaster.
@nl
P2860
P1476
Large-scale discovery of promoter motifs in Drosophila melanogaster
@en
P2093
Thomas A Down
P2860
P356
10.1371/JOURNAL.PCBI.0030007
P577
2006-12-05T00:00:00Z