Potential energy landscape and robustness of a gene regulatory network: toggle switch.
about
Computation of steady-state probability distributions in stochastic models of cellular networksLoads bias genetic and signaling switches in synthetic and natural systemsACCURATE CHEMICAL MASTER EQUATION SOLUTION USING MULTI-FINITE BUFFERSComplete integrability of information processing by biochemical reactionsState Space Truncation with Quantified Errors for Accurate Solutions to Discrete Chemical Master EquationClassification of transient behaviours in a time-dependent toggle switch modelOptimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability.Computational Cellular Dynamics Based on the Chemical Master Equation: A Challenge for Understanding Complexity.Potential landscape and probabilistic flux of a predator prey network.A deterministic map of Waddington's epigenetic landscape for cell fate specification.Potential and flux landscapes quantify the stability and robustness of budding yeast cell cycle networkInformation-theoretic analysis of phenotype changes in early stages of carcinogenesis.The potential landscape of genetic circuits imposes the arrow of time in stem cell differentiationLandscape and flux reveal a new global view and physical quantification of mammalian cell cyclePredicting rates of cell state change caused by stochastic fluctuations using a data-driven landscape model.Epigenetic chromatin silencing: bistability and front propagationQuantifying robustness and dissipation cost of yeast cell cycle network: the funneled energy landscape perspectivesPropagation of large concentration changes in reversible protein-binding networks.Dynamical systems approach to endothelial heterogeneity.Intrinsic noise, dissipation cost, and robustness of cellular networks: the underlying energy landscape of MAPK signal transductionPotential landscape and flux framework of nonequilibrium networks: robustness, dissipation, and coherence of biochemical oscillations.Engineering of regulated stochastic cell fate determinationAdaptively biased sequential importance sampling for rare events in reaction networks with comparison to exact solutions from finite buffer dCME method.Robustness, dissipations and coherence of the oscillation of circadian clock: potential landscape and flux perspectives.Eddy current and coupled landscapes for nonadiabatic and nonequilibrium complex system dynamics.Cell fate decision mediated by p53 pulsesNonequilibrium landscape theory of neural networks.Systems biology and cancer prevention: all options on the table.Robustness and coherence of a three-protein circadian oscillator: landscape and flux perspectives.A critical quantity for noise attenuation in feedback systems.Modeling stochastic dynamics in biochemical systems with feedback using maximum caliber.Funneled potential and flux landscapes dictate the stabilities of both the states and the flow: Fission yeast cell cycle.Inferring gene regulatory networks from single-cell data: a mechanistic approach.The potential and flux landscape theory of evolution.Transcription factor binding kinetics constrain noise suppression via negative feedback.Reduction of the chemical master equation for gene regulatory networks using proper generalized decompositions.The energy pump and the origin of the non-equilibrium flux of the dynamical systems and the networks.Approximation scheme based on effective interactions for stochastic gene regulation.Exact probabilistic solution of spatial-dependent stochastics and associated spatial potential landscape for the bicoid protein.Least dissipation cost as a design principle for robustness and function of cellular networks.
P2860
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P2860
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
description
2007 nî lūn-bûn
@nan
2007 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@ast
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@en
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@nl
type
label
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@ast
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@en
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@nl
prefLabel
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@ast
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@en
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@nl
P2860
P1476
Potential energy landscape and robustness of a gene regulatory network: toggle switch.
@en
P2093
Keun-Young Kim
P2860
P356
10.1371/JOURNAL.PCBI.0030060
P577
2007-02-14T00:00:00Z