High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry
about
Proteomics reveals novel Drosophila seminal fluid proteins transferred at matingGlobal analysis of condition-specific subcellular protein distribution and abundanceQuantitative proteomic and interaction network analysis of cisplatin resistance in HeLa cellsKojak: efficient analysis of chemically cross-linked protein complexes.Identification of tandem mass spectra of mixtures of isomeric peptides.FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry.Modeling peptide fragmentation with dynamic Bayesian networks for peptide identificationIsotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matchingNeutron-encoded signatures enable product ion annotation from tandem mass spectra.Multiplexed MS/MS for improved data-independent acquisition.Multiplexed and data-independent tandem mass spectrometry for global proteome profiling.MASH Suite: a user-friendly and versatile software interface for high-resolution mass spectrometry data interpretation and visualizationComprehensive absolute quantification of the cytosolic proteome of Bacillus subtilis by data independent, parallel fragmentation in liquid chromatography/mass spectrometry (LC/MS(E))Using Data Independent Acquisition (DIA) to Model High-responding Peptides for Targeted Proteomics Experiments.Fast and Accurate Protein False Discovery Rates on Large-Scale Proteomics Data Sets with Percolator 3.0.LC-MSsim--a simulation software for liquid chromatography mass spectrometry dataPost analysis data acquisition for the iterative MS/MS sampling of proteomics mixturesDecon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data.Nanospray FAIMS fractionation provides significant increases in proteome coverage of unfractionated complex protein digests.Comparison of database search strategies for high precursor mass accuracy MS/MS dataDeconvolution of mixture spectra from ion-trap data-independent-acquisition tandem mass spectrometry.xComb: a cross-linked peptide database approach to protein-protein interaction analysisFeature detection techniques for preprocessing proteomic data.Assessing the dynamic range and peak capacity of nanoflow LC-FAIMS-MS on an ion trap mass spectrometer for proteomics.MacroSEQUEST: efficient candidate-centric searching and high-resolution correlation analysis for large-scale proteomics data sets.Streptococcus pneumoniae detects and responds to foreign bacterial peptide fragments in its environmentAccurate peak list extraction from proteomic mass spectra for identification and profiling studies.Discussion on common data analysis strategies used in MS-based proteomics.Simulating and validating proteomics data and search results.Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling.Mass spectrometric analysis of histone proteoforms.A metaproteomic approach to study human-microbial ecosystems at the mucosal luminal interface.Capillary electrophoresis with Orbitrap-Velos mass spectrometry detection.Determination of monoisotopic masses of chimera spectra from high-resolution mass spectrometric data by use of isotopic peak intensity ratio modeling.Design and application of a data-independent precursor and product ion repository.A probabilistic framework for peptide and protein quantification from data-dependent and data-independent LC-MS proteomics experiments.Cause or effect of arteriogenesis: compositional alterations of microparticles from CAD patients undergoing external counterpulsation therapy.Improved strategies for rapid identification of chemically cross-linked peptides using protein interaction reporter technology.Protein analysis by shotgun/bottom-up proteomicsBioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities.
P2860
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P2860
High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry
description
2007 nî lūn-bûn
@nan
2007 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
High-speed data reduction, fea ...... h-resolution mass spectrometry
@ast
High-speed data reduction, fea ...... h-resolution mass spectrometry
@en
type
label
High-speed data reduction, fea ...... h-resolution mass spectrometry
@ast
High-speed data reduction, fea ...... h-resolution mass spectrometry
@en
prefLabel
High-speed data reduction, fea ...... h-resolution mass spectrometry
@ast
High-speed data reduction, fea ...... h-resolution mass spectrometry
@en
P2860
P356
P1433
P1476
High-speed data reduction, fea ...... h-resolution mass spectrometry
@en
P2093
Gregory L Finney
Michael R Hoopmann
P2860
P304
P356
10.1021/AC0700833
P407
P577
2007-06-21T00:00:00Z