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Genome-wide patterns of nucleotide polymorphism in domesticated rice

Genome-wide patterns of nucleotide polymorphism in domesticated rice

http://www.wikidata.org/entity/Q33301014

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Genomic identification of founding haplotypes reveals the history of the selfing species Capsella rubella New insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varieties Variation, sex, and social cooperation: molecular population genetics of the social amoeba Dictyostelium discoideum Patterns of polymorphism and demographic history in natural populations of Arabidopsis lyrata Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data Genetic draft and quasi-neutrality in large facultatively sexual populations Artificial selection for a green revolution gene during japonica rice domestication.Review of functional markers for improving cooking, eating, and the nutritional qualities of rice.Association Analysis in Rice: From Application to Utilization The genomics of selection in dogs and the parallel evolution between dogs and humans Molecular evidence for a single evolutionary origin of domesticated rice Genome-wide signatures of population bottlenecks and diversifying selection in European wolves Multilocus patterns of nucleotide polymorphism and the demographic history of Populus tremula Genomic variation associated with local adaptation of weedy rice during de-domestication SNPs in stress-responsive rice genes: validation, genotyping, functional relevance and population structure Inferring population size changes with sequence and SNP data: lessons from human bottlenecks.Estimating inbreeding coefficients from NGS data: Impact on genotype calling and allele frequency estimation A review of microsatellite markers and their applications in rice breeding programs to improve blast disease resistance A strategy for genome-wide identification of gene based polymorphisms in rice reveals non-synonymous variation and functional genotypic markers.Molecular ecology and selection in the drought-related Asr gene polymorphisms in wild and cultivated common bean (Phaseolus vulgaris L.).Amount of information needed for model choice in Approximate Bayesian Computation.TriMEDB: a database to integrate transcribed markers and facilitate genetic studies of the tribe Triticeae.miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species.Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data.Genic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups.Multilocus sequence data reveal extensive departures from equilibrium in domesticated tomato (Solanum lycopersicum L.).Gene expression profiles deciphering rice phenotypic variation between Nipponbare (Japonica) and 93-11 (Indica) during oxidative stress Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in Heliconius erato Massive gene losses in Asian cultivated rice unveiled by comparative genome analysis Genetic structure and isolation by altitude in rice landraces of Yunnan, China revealed by nucleotide and microsatellite marker polymorphisms.Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome.Genome-Wide Association Mapping Reveals Multiple QTLs Governing Tolerance Response for Seedling Stage Chilling Stress in Indica Rice.Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice.Archaeological and genetic insights into the origins of domesticated rice Population genetics of foxtail millet and its wild ancestor.Population genetic inference from genomic sequence variation Asian wild rice is a hybrid swarm with extensive gene flow and feralization from domesticated rice.Novel Phr1 mutations and the evolution of phenol reaction variation in US weedy rice (Oryza sativa).Genomics and bioinformatics resources for crop improvement.Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.).

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

http://www.wikidata.org/entity/Q33301014

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2007 nî lūn-bûn

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2007 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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2007 թվականի օգոստոսին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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name

Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice.

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice.

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Genome-wide patterns of nucleotide polymorphism in domesticated rice.

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

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Adam Boyko

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Adi Fledel-Alon

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Ana L Caicedo

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Kenneth M Olsen

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Michael D Purugganan

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Nicholas R Polato

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Ryan D Hernandez

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Scott H Williamson

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Susan R McCouch

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P2860

The pattern of polymorphism in Arabidopsis thaliana

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

Genetic structure and diversity in Oryza sativa L

Inference of population structure using multilocus genotype data

Hitchhiking under positive Darwinian selection

Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa

Genealogy of neutral genes and spreading of selected mutations in a geographically structured population

Investigation of the bottleneck leading to the domestication of maize

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1745-1756

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10.1371/JOURNAL.PGEN.0030163

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Carlos D. Bustamante

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